Gm56254 Gene Detail

Summary

• Symbol
  Gm56254
• Name
  predicted gene, 56254

• Feature Type
  miRNA gene
• IDs
  MGI:6848966
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr5:141015683-141015763 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  77 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848966	miRNA gene	Chr5:141015683-141015763 (+)
129S1/SvImJ	ENSMUSG00200042609	miRNA gene	Chr5:134877004-134877084 (+)
A/J	ENSMUSG00195046650	miRNA gene	Chr5:134507770-134507850 (+)
AKR/J	ENSMUSG00220024060	miRNA gene	Chr5:133758495-133758575 (+)
BALB/cJ	ENSMUSG00180034925	miRNA gene	Chr5:134608270-134608350 (+)
C3H/HeJ	ENSMUSG00175049297	miRNA gene	Chr5:136535598-136535678 (+)
C57BL/6NJ	ENSMUSG00215041349	miRNA gene	Chr5:134461783-134461863 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005037621	miRNA gene	Chr5:133911557-133911637 (+)
CBA/J	ENSMUSG00210024122	miRNA gene	Chr5:135352279-135352359 (+)
DBA/2J	ENSMUSG00185055462	miRNA gene	Chr5:138361178-138361258 (+)
FVB/NJ	ENSMUSG00205044242	miRNA gene	Chr5:134166266-134166346 (+)
JF1/MsJ	ENSUMUG00000054833	miRNA gene	Chr5:141235793-141235871 (+)
LP/J	ENSMUSG00230031236	miRNA gene	Chr5:142476889-142476969 (+)
NOD/ShiLtJ	ENSMUSG00190046211	miRNA gene	Chr5:134303513-134303593 (+)
NZO/HlLtJ	ENSMUSG00225023937	miRNA gene	Chr5:149945252-149945332 (+)
PWK/PhJ	ENSLUMG00010021822	miRNA gene	Chr5:132957227-132957305 (+)
SPRET/EiJ	ENSMSPG00010042046	miRNA gene	Chr5:136559519-136559587 (+)
WSB/EiJ	ENSIUOG00005040588	miRNA gene	Chr5:136830664-136830744 (+)

Homology

• Gene Tree
  Gm56254
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075916 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075916	Ensembl Gene Model | MGI Sequence Detail	81	C57BL/6J
transcript	ENSMUST00020182779	Ensembl | MGI Sequence Detail	81	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;