Gm56250 Gene Detail

Summary

• Symbol
  Gm56250
• Name
  predicted gene, 56250

• Feature Type
  unclassified non-coding RNA gene
• IDs
  MGI:6848958
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr1:104413682-104414011 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  111 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848958	unclassified non-coding RNA gene	Chr1:104413682-104414011 (+)
129S1/SvImJ	ENSMUSG00200000544	unclassified non-coding RNA gene	Chr1:101687673-101688002 (+)
A/J	ENSMUSG00195000537	unclassified non-coding RNA gene	Chr1:101160858-101161187 (+)
AKR/J	ENSMUSG00220000355	unclassified non-coding RNA gene	Chr1:101224091-101224420 (+)
BALB/cJ	ENSMUSG00180000514	unclassified non-coding RNA gene	Chr1:101448242-101448571 (+)
C3H/HeJ	ENSMUSG00175000609	unclassified non-coding RNA gene	Chr1:101354355-101354684 (+)
C57BL/6NJ	ENSMUSG00215008195	unclassified non-coding RNA gene	Chr1:101400551-101400880 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005000182	unclassified non-coding RNA gene	Chr1:100748012-100748341 (+)
CBA/J	ENSMUSG00210000234	unclassified non-coding RNA gene	Chr1:101248322-101248651 (+)
DBA/2J	ENSMUSG00185008903	unclassified non-coding RNA gene	Chr1:105713988-105714317 (+)
FVB/NJ	ENSMUSG00205001000	unclassified non-coding RNA gene	Chr1:100547870-100548199 (+)
JF1/MsJ	ENSUMUG00000000259	unclassified non-coding RNA gene	Chr1:104347123-104347452 (+)
LP/J	ENSMUSG00230000203	unclassified non-coding RNA gene	Chr1:104976921-104977250 (+)
NOD/ShiLtJ	ENSMUSG00190000438	unclassified non-coding RNA gene	Chr1:101375434-101375763 (+)
NZO/HlLtJ	ENSMUSG00225000343	unclassified non-coding RNA gene	Chr1:108853088-108853417 (+)
PWK/PhJ	ENSLUMG00010006455	unclassified non-coding RNA gene	Chr1:100749518-100749847 (+)
SPRET/EiJ	ENSMSPG00010000613	unclassified non-coding RNA gene	Chr1:103013032-103013365 (+)
WSB/EiJ	ENSIUOG00005000322	unclassified non-coding RNA gene	Chr1:101046092-101046421 (+)

Homology

• Gene Tree
  Gm56250
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076592 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076592	Ensembl Gene Model | MGI Sequence Detail	330	C57BL/6J
transcript	ENSMUST00020182492	Ensembl | MGI Sequence Detail	330	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;