Gm56247 Gene Detail

Summary

• Symbol
  Gm56247
• Name
  predicted gene, 56247

• Feature Type
  rRNA gene
• IDs
  MGI:6848952
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr11:86299652-86299771 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  88 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848952	rRNA gene	Chr11:86299652-86299771 (+)
129S1/SvImJ	ENSMUSG00200020375	rRNA gene	Chr11:83447183-83447302 (+)
A/J	ENSMUSG00195009271	rRNA gene	Chr11:83301879-83301998 (+)
AKR/J	ENSMUSG00220012410	rRNA gene	Chr11:83501503-83501622 (+)
BALB/cJ	ENSMUSG00180011517	rRNA gene	Chr11:83491158-83491277 (+)
C3H/HeJ	ENSMUSG00175033312	rRNA gene	Chr11:83448578-83448697 (+)
C57BL/6NJ	ENSMUSG00215030297	rRNA gene	Chr11:83075001-83075120 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005017553	rRNA gene	Chr11:82992167-82992286 (+)
CBA/J	ENSMUSG00210040520	rRNA gene	Chr11:83266159-83266278 (+)
DBA/2J	ENSMUSG00185020113	rRNA gene	Chr11:83582926-83583045 (+)
FVB/NJ	ENSMUSG00205023901	rRNA gene	Chr11:83379132-83379251 (+)
JF1/MsJ	ENSUMUG00000031695	rRNA gene	Chr11:83900793-83900912 (+)
LP/J	ENSMUSG00230030031	rRNA gene	Chr11:84616216-84616335 (+)
NOD/ShiLtJ	ENSMUSG00190020779	rRNA gene	Chr11:83591050-83591169 (+)
NZO/HlLtJ	ENSMUSG00225040186	rRNA gene	Chr11:86726949-86727068 (+)
PWK/PhJ	ENSLUMG00010034822	rRNA gene	Chr11:83400647-83400766 (+)
SPRET/EiJ	ENSMSPG00010030768	rRNA gene	Chr11:83872895-83873014 (+)
WSB/EiJ	ENSIUOG00005008509	rRNA gene	Chr11:83410271-83410390 (+)

Homology

• Gene Tree
  Gm56247
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075568 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075568	Ensembl Gene Model | MGI Sequence Detail	120	C57BL/6J
transcript	ENSMUST00020181921	Ensembl | MGI Sequence Detail	120	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;