Gm56245 Gene Detail

Summary

• Symbol
  Gm56245
• Name
  predicted gene, 56245

• Feature Type
  miRNA gene
• IDs
  MGI:6848948
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr7:11037145-11037265 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  29 from dbSNP Build 142
• Strain Annotations
  35

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848948	miRNA gene	Chr7:11037145-11037265 (-)
129S1/SvImJ	ENSMUSG00200043018	miRNA gene	Chr7:5170728-5170848 (-)
A/J	ENSMUSG00195043297	miRNA gene	Chr7:126313348-126313467 (+)
A/J	ENSMUSG00195053389	miRNA gene	Chr7:4906772-4906892 (-)
AKR/J	no annotation
BALB/cJ	ENSMUSG00180051309	miRNA gene	Chr7:4864452-4864572 (-)
BALB/cJ	ENSMUSG00180043566	miRNA gene	Chr7:123016879-123016998 (+)
C3H/HeJ	ENSMUSG00175050452	miRNA gene	Chr7:5014557-5014677 (-)
C57BL/6NJ	ENSMUSG00215045747	miRNA gene	Chr7:5606801-5606921 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005032341	miRNA gene	Chr7:5050401-5050521 (-)
CBA/J	no annotation
DBA/2J	ENSMUSG00185045742	miRNA gene	Chr7:7910477-7910597 (-)
FVB/NJ	ENSMUSG00205049644	miRNA gene	Chr7:5287357-5287477 (-)
JF1/MsJ	ENSUMUG00000006293	miRNA gene	Chr3:107354747-107354867 (-)
JF1/MsJ	ENSUMUG00000054641	miRNA gene	Chr7:7662577-7662697 (-)
LP/J	ENSMUSG00230048150	miRNA gene	Chr7:11687234-11687354 (-)
LP/J	ENSMUSG00230026381	miRNA gene	Chr9:79091008-79091128 (-)
LP/J	ENSMUSG00230033727	miRNA gene	ChrX:147010629-147010749 (-)
LP/J	ENSMUSG00230024833	miRNA gene	Chr3:36105405-36105525 (-)
LP/J	ENSMUSG00230016170	miRNA gene	Chr15:30914656-30914781 (-)
LP/J	ENSMUSG00230004089	miRNA gene	Chr5:19446455-19446570 (+)
LP/J	ENSMUSG00230004125	miRNA gene	Chr5:19459497-19459623 (+)
LP/J	ENSMUSG00230048163	miRNA gene	Chr7:12092851-12092971 (-)
LP/J	ENSMUSG00230016186	miRNA gene	Chr15:30920634-30920759 (-)
LP/J	ENSMUSG00230016732	miRNA gene	Chr7:30726446-30726566 (+)
NOD/ShiLtJ	ENSMUSG00190051022	miRNA gene	Chr7:5065192-5065312 (-)
NOD/ShiLtJ	ENSMUSG00190035578	miRNA gene	Chr7:123622087-123622206 (+)
NZO/HlLtJ	ENSMUSG00225010357	miRNA gene	Chr5:24843616-24843735 (+)
NZO/HlLtJ	ENSMUSG00225018678	miRNA gene	Chr6:129545079-129545205 (+)
NZO/HlLtJ	ENSMUSG00225053308	miRNA gene	Chr7:132185861-132185980 (+)
NZO/HlLtJ	ENSMUSG00225026278	miRNA gene	Chr9:79291156-79309105 (-)
NZO/HlLtJ	ENSMUSG00225022177	miRNA gene	Chr7:9690172-9690292 (-)
NZO/HlLtJ	ENSMUSG00225043721	miRNA gene	ChrX:151745173-151745293 (-)
NZO/HlLtJ	ENSMUSG00225006636	miRNA gene	Chr1:155769825-155769945 (+)
NZO/HlLtJ	ENSMUSG00225007592	miRNA gene	Chr3:38716284-38716404 (-)
PWK/PhJ	ENSLUMG00010052171	miRNA gene	Chr7:8702228-8702348 (-)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005052446	miRNA gene	Chr7:5185799-5185919 (-)

Homology

• Gene Tree
  Gm56245
  

Sequences &
Gene Models

• All Sequences
  37

• Ensembl
  ENSMUSG00002074860 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002074860	Ensembl Gene Model | MGI Sequence Detail	121	C57BL/6J
transcript	ENSMUST00020183133	Ensembl | MGI Sequence Detail	121	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;