Gm56240 Gene Detail

Summary

• Symbol
  Gm56240
• Name
  predicted gene, 56240

• Feature Type
  rRNA gene
• IDs
  MGI:6848938
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr11:85669638-85669753 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  61 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848938	rRNA gene	Chr11:85669638-85669753 (+)
129S1/SvImJ	ENSMUSG00200020535	rRNA gene	Chr11:82824845-82824960 (+)
A/J	ENSMUSG00195009776	rRNA gene	Chr11:82679477-82679592 (+)
AKR/J	ENSMUSG00220012422	rRNA gene	Chr11:82871195-82871311 (+)
BALB/cJ	ENSMUSG00180011923	rRNA gene	Chr11:82861072-82861187 (+)
C3H/HeJ	ENSMUSG00175032658	rRNA gene	Chr11:82826249-82826364 (+)
C57BL/6NJ	ENSMUSG00215029907	rRNA gene	Chr11:82444933-82445048 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005046515	rRNA gene	Chr11:82370451-82370567 (+)
CBA/J	ENSMUSG00210041571	rRNA gene	Chr11:82643825-82643940 (+)
DBA/2J	ENSMUSG00185020181	rRNA gene	Chr11:82952670-82952786 (+)
FVB/NJ	ENSMUSG00205023813	rRNA gene	Chr11:82748993-82749108 (+)
JF1/MsJ	ENSUMUG00000028619	rRNA gene	Chr11:83274312-83274428 (+)
LP/J	ENSMUSG00230030010	rRNA gene	Chr11:83993876-83993991 (+)
NOD/ShiLtJ	ENSMUSG00190020707	rRNA gene	Chr11:82960998-82961113 (+)
NZO/HlLtJ	ENSMUSG00225040154	rRNA gene	Chr11:86096897-86097012 (+)
PWK/PhJ	ENSLUMG00010034486	rRNA gene	Chr11:82773492-82773608 (+)
SPRET/EiJ	ENSMSPG00010028420	rRNA gene	Chr11:83238130-83238247 (+)
WSB/EiJ	ENSIUOG00005008608	rRNA gene	Chr11:82780785-82780900 (+)

Homology

• Gene Tree
  Gm56240
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076069 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076069	Ensembl Gene Model | MGI Sequence Detail	116	C57BL/6J
transcript	ENSMUST00020183792	Ensembl | MGI Sequence Detail	116	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;