Gm56233 Gene Detail

Summary

• Symbol
  Gm56233
• Name
  predicted gene, 56233

• Feature Type
  miRNA gene
• IDs
  MGI:6848924
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr1:170907409-170907470 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  18 from dbSNP Build 142
• Strain Annotations
  10

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848924	miRNA gene	Chr1:170907409-170907470 (-)
129S1/SvImJ	no annotation
A/J	ENSMUSG00195049656	miRNA gene	Chr1:167706235-167706296 (-)
AKR/J	ENSMUSG00220033153	miRNA gene	Chr1:167491156-167491217 (-)
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	ENSMUSG00215045307	miRNA gene	Chr1:167841140-167841201 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	ENSMUSG00205040335	miRNA gene	Chr1:166912573-166912634 (-)
JF1/MsJ	ENSUMUG00000012312	miRNA gene	Chr1:171299700-171299761 (-)
LP/J	ENSMUSG00230027439	miRNA gene	Chr1:171798352-171798413 (-)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	ENSMUSG00225005196	miRNA gene	Chr1:175412117-175412178 (-)
PWK/PhJ	ENSLUMG00010034802	miRNA gene	Chr1:166688056-166688117 (-)
SPRET/EiJ	ENSMSPG00010049213	miRNA gene	Chr1:170247706-170247767 (-)
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm56233
  

Sequences &
Gene Models

• All Sequences
  12

• Ensembl
  ENSMUSG00002075095 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075095	Ensembl Gene Model | MGI Sequence Detail	62	C57BL/6J
transcript	ENSMUST00020182833	Ensembl | MGI Sequence Detail	62	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;