Gm56220 Gene Detail

Summary

• Symbol
  Gm56220
• Name
  predicted gene, 56220

• Feature Type
  miRNA gene
• IDs
  MGI:6848898
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr4:13622643-13622763 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  105 from dbSNP Build 142
• Strain Annotations
  15

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848898	miRNA gene	Chr4:13622643-13622763 (-)
129S1/SvImJ	ENSMUSG00200001163	miRNA gene	Chr4:10261802-10261922 (-)
A/J	ENSMUSG00195017010	miRNA gene	Chr4:10705218-10705338 (-)
AKR/J	ENSMUSG00220001346	miRNA gene	Chr4:10445622-10445742 (-)
BALB/cJ	ENSMUSG00180001971	miRNA gene	Chr4:10209377-10209497 (-)
C3H/HeJ	ENSMUSG00175018571	miRNA gene	Chr4:10737321-10737441 (-)
C57BL/6NJ	ENSMUSG00215010535	miRNA gene	Chr4:10373303-10373423 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	ENSMUSG00210001636	miRNA gene	Chr4:10475034-10475154 (-)
DBA/2J	ENSMUSG00185001337	miRNA gene	Chr4:10585256-10585376 (-)
FVB/NJ	ENSMUSG00205001900	miRNA gene	Chr4:10133963-10134083 (-)
JF1/MsJ	ENSUMUG00000001741	miRNA gene	Chr4:10665138-10665222 (-)
LP/J	ENSMUSG00230001501	miRNA gene	Chr4:13758727-13758847 (-)
NOD/ShiLtJ	ENSMUSG00190025989	miRNA gene	Chr4:10326906-10327026 (-)
NZO/HlLtJ	ENSMUSG00225008810	miRNA gene	Chr4:17750555-17750675 (-)
PWK/PhJ	no annotation
SPRET/EiJ	ENSMSPG00010013400	miRNA gene	Chr4:10530786-10530895 (-)
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm56220
  

Sequences &
Gene Models

• All Sequences
  17

• Ensembl
  ENSMUSG00002075365 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075365	Ensembl Gene Model | MGI Sequence Detail	121	C57BL/6J
transcript	ENSMUST00020181959	Ensembl | MGI Sequence Detail	121	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;