Gm56209 Gene Detail

Summary

• Symbol
  Gm56209
• Name
  predicted gene, 56209

• Feature Type
  miRNA gene
• IDs
  MGI:6848876
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr1:67656134-67656211 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  22 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848876	miRNA gene	Chr1:67656134-67656211 (+)
129S1/SvImJ	ENSMUSG00200005011	miRNA gene	Chr1:65212992-65213069 (+)
A/J	ENSMUSG00195032817	miRNA gene	Chr1:64751380-64751457 (+)
AKR/J	ENSMUSG00220038963	miRNA gene	Chr1:64880788-64880865 (+)
BALB/cJ	ENSMUSG00180032103	miRNA gene	Chr1:64986047-64986124 (+)
C3H/HeJ	ENSMUSG00175000945	miRNA gene	Chr1:65136043-65136120 (+)
C57BL/6NJ	ENSMUSG00215024505	miRNA gene	Chr1:65024559-65024636 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005022421	miRNA gene	Chr1:64800215-64800292 (+)
CBA/J	ENSMUSG00210003346	miRNA gene	Chr1:64804854-64804931 (+)
DBA/2J	ENSMUSG00185005403	miRNA gene	Chr1:65922080-65922157 (+)
FVB/NJ	ENSMUSG00205016396	miRNA gene	Chr1:64599739-64599816 (+)
JF1/MsJ	ENSUMUG00000004704	miRNA gene	Chr1:64819497-64819574 (+)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190014503	miRNA gene	Chr1:65003496-65003573 (+)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010008006	miRNA gene	Chr1:64348279-64348356 (+)
SPRET/EiJ	ENSMSPG00010019731	miRNA gene	Chr1:66393071-66393145 (+)
WSB/EiJ	ENSIUOG00005029587	miRNA gene	Chr1:64677636-64677713 (+)

Homology

• Gene Tree
  Gm56209
  

Sequences &
Gene Models

• All Sequences
  18

• Ensembl
  ENSMUSG00002076414 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076414	Ensembl Gene Model | MGI Sequence Detail	78	C57BL/6J
transcript	ENSMUST00020182130	Ensembl | MGI Sequence Detail	78	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;