Gm56199 Gene Detail

Summary

• Symbol
  Gm56199
• Name
  predicted gene, 56199

• Feature Type
  rRNA gene
• IDs
  MGI:6848856
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr11:57655253-57655371 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  133 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848856	rRNA gene	Chr11:57655253-57655371 (+)
129S1/SvImJ	ENSMUSG00200037307	rRNA gene	Chr11:54651361-54651479 (+)
A/J	ENSMUSG00195041793	rRNA gene	Chr11:54585363-54585481 (+)
AKR/J	ENSMUSG00220050968	rRNA gene	Chr11:54741811-54741929 (+)
BALB/cJ	ENSMUSG00180049745	rRNA gene	Chr11:54661850-54661968 (+)
C3H/HeJ	ENSMUSG00175049872	rRNA gene	Chr11:54620464-54620582 (+)
C57BL/6NJ	ENSMUSG00215039748	rRNA gene	Chr11:54445011-54445129 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005046789	rRNA gene	Chr11:54162390-54162508 (+)
CBA/J	ENSMUSG00210039151	rRNA gene	Chr11:54472123-54472241 (+)
DBA/2J	ENSMUSG00185043990	rRNA gene	Chr11:54657004-54657122 (+)
FVB/NJ	ENSMUSG00205052006	rRNA gene	Chr11:54524876-54524994 (+)
JF1/MsJ	ENSUMUG00000050460	rRNA gene	Chr11:55007631-55007749 (+)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190051705	rRNA gene	Chr11:54710558-54710676 (+)
NZO/HlLtJ	ENSMUSG00225032895	rRNA gene	Chr11:57880101-57880219 (+)
PWK/PhJ	ENSLUMG00010034973	rRNA gene	Chr11:54456600-54456718 (+)
SPRET/EiJ	ENSMSPG00010041446	rRNA gene	Chr11:55247359-55247477 (+)
WSB/EiJ	ENSIUOG00005041093	rRNA gene	Chr11:54512713-54512831 (+)

Homology

• Gene Tree
  Gm56199
  

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00002075530 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075530	Ensembl Gene Model | MGI Sequence Detail	119	C57BL/6J
transcript	ENSMUST00020182345	Ensembl | MGI Sequence Detail	119	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;