Gm56188 Gene Detail

Summary

• Symbol
  Gm56188
• Name
  predicted gene, 56188

• Feature Type
  miRNA gene
• IDs
  MGI:6848834
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr2:74531350-74531486 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  36 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848834	miRNA gene	Chr2:74531350-74531486 (-)
129S1/SvImJ	ENSMUSG00200004108	miRNA gene	Chr2:71579982-71580118 (-)
A/J	ENSMUSG00195019774	miRNA gene	Chr2:71726686-71726822 (-)
AKR/J	ENSMUSG00220002351	miRNA gene	Chr2:71691319-71691455 (-)
BALB/cJ	ENSMUSG00180007081	miRNA gene	Chr2:71680341-71680477 (-)
C3H/HeJ	ENSMUSG00175011204	miRNA gene	Chr2:71806236-71806372 (-)
C57BL/6NJ	ENSMUSG00215031277	miRNA gene	Chr2:71643183-71643319 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005031328	miRNA gene	Chr2:71120092-71120228 (-)
CBA/J	ENSMUSG00210002415	miRNA gene	Chr2:71848892-71849028 (-)
DBA/2J	ENSMUSG00185011869	miRNA gene	Chr2:71684737-71684873 (-)
FVB/NJ	ENSMUSG00205020863	miRNA gene	Chr2:71136717-71136853 (-)
JF1/MsJ	ENSUMUG00000044083	miRNA gene	Chr2:71361911-71362047 (-)
LP/J	ENSMUSG00230026168	miRNA gene	Chr2:73479570-73479706 (-)
NOD/ShiLtJ	ENSMUSG00190010879	miRNA gene	Chr2:71759445-71759581 (-)
NZO/HlLtJ	ENSMUSG00225015234	miRNA gene	Chr2:81243637-81243773 (-)
PWK/PhJ	ENSLUMG00010032652	miRNA gene	Chr2:71600235-71600371 (-)
SPRET/EiJ	ENSMSPG00010022292	miRNA gene	Chr2:73000208-73000343 (-)
WSB/EiJ	ENSIUOG00005011413	miRNA gene	Chr2:71802718-71802854 (-)

Homology

• Gene Tree
  Gm56188
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Targeted
  1
• Genomic Mutations
  1 involving Gm56188
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076500 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076500	Ensembl Gene Model | MGI Sequence Detail	137	C57BL/6J
transcript	ENSMUST00020182558	Ensembl | MGI Sequence Detail	137	Not Applicable

References

• Summaries
  All 2

  Phenotypes 1
• Earliest
  J:308920 Bolt CC, et al., Mesomelic dysplasias associated with the HOXD locus are caused by regulatory reallocations. Nat Commun. 2021 Aug 18;12(1):5013