Gm56180 Gene Detail

Summary

• Symbol
  Gm56180
• Name
  predicted gene, 56180

• Feature Type
  snoRNA gene
• IDs
  MGI:6848818
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr2:22792400-22792519 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  62 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848818	snoRNA gene	Chr2:22792400-22792519 (+)
129S1/SvImJ	ENSMUSG00200042324	snoRNA gene	Chr2:19770290-19770409 (+)
A/J	ENSMUSG00195019521	snoRNA gene	Chr2:19865546-19865665 (+)
AKR/J	ENSMUSG00220013939	snoRNA gene	Chr2:19986677-19986796 (+)
BALB/cJ	ENSMUSG00180038823	snoRNA gene	Chr2:19871426-19871545 (+)
C3H/HeJ	ENSMUSG00175023853	snoRNA gene	Chr2:19836048-19836167 (+)
C57BL/6NJ	ENSMUSG00215035469	snoRNA gene	Chr2:19895812-19895931 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005004485	snoRNA gene	Chr2:19599544-19599663 (+)
CBA/J	ENSMUSG00210003949	snoRNA gene	Chr2:19875026-19875145 (+)
DBA/2J	ENSMUSG00185039860	snoRNA gene	Chr2:19779897-19780016 (+)
FVB/NJ	ENSMUSG00205014516	snoRNA gene	Chr2:19800352-19800471 (+)
JF1/MsJ	ENSUMUG00000004421	snoRNA gene	Chr2:19665374-19665493 (+)
LP/J	ENSMUSG00230046690	snoRNA gene	Chr2:21706284-21706403 (+)
NOD/ShiLtJ	ENSMUSG00190015109	snoRNA gene	Chr2:19866016-19866135 (+)
NZO/HlLtJ	ENSMUSG00225001823	snoRNA gene	Chr2:29456890-29457009 (+)
PWK/PhJ	ENSLUMG00010035091	snoRNA gene	Chr2:19768233-19768352 (+)
SPRET/EiJ	ENSMSPG00010047217	snoRNA gene	Chr2:20359025-20359144 (+)
WSB/EiJ	ENSIUOG00005015678	snoRNA gene	Chr2:19686893-19687012 (+)

Homology

• Gene Tree
  Gm56180
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076724 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076724	Ensembl Gene Model | MGI Sequence Detail	120	C57BL/6J
transcript	ENSMUST00020183157	Ensembl | MGI Sequence Detail	120	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;