Gm56173 Gene Detail

Summary

• Symbol
  Gm56173
• Name
  predicted gene, 56173

• Feature Type
  rRNA gene
• IDs
  MGI:6848804
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr7:6515234-6515341 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  123 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848804	rRNA gene	Chr7:6515234-6515341 (+)
129S1/SvImJ	ENSMUSG00200043133	rRNA gene	Chr7:3395897-3396004 (+)
A/J	ENSMUSG00195052197	rRNA gene	Chr7:3247012-3247119 (+)
AKR/J	ENSMUSG00220029443	rRNA gene	Chr7:892153-892260 (+)
BALB/cJ	ENSMUSG00180050438	rRNA gene	Chr7:3202282-3202389 (+)
C3H/HeJ	ENSMUSG00175051152	rRNA gene	Chr7:3130306-3130413 (+)
C57BL/6NJ	ENSMUSG00215044957	rRNA gene	Chr7:3250737-3250844 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005031330	rRNA gene	Chr7:3332364-3332468 (+)
CBA/J	ENSMUSG00210048097	rRNA gene	Chr7:3158466-3158573 (+)
DBA/2J	ENSMUSG00185046544	rRNA gene	Chr7:3390770-3390877 (+)
FVB/NJ	ENSMUSG00205048835	rRNA gene	Chr7:3018712-3018815 (+)
JF1/MsJ	ENSUMUG00000054861	rRNA gene	Chr7:3486220-3486323 (+)
LP/J	ENSMUSG00230041159	rRNA gene	Chr7:6401489-6401596 (+)
NOD/ShiLtJ	ENSMUSG00190049850	rRNA gene	Chr7:3280684-3280791 (+)
NZO/HlLtJ	ENSMUSG00225021303	rRNA gene	Chr7:4248013-4248120 (+)
PWK/PhJ	ENSLUMG00010050639	rRNA gene	Chr7:6954817-6954920 (+)
SPRET/EiJ	ENSMSPG00010049181	rRNA gene	Chr7:2982843-2982947 (+)
WSB/EiJ	ENSIUOG00005053043	rRNA gene	Chr7:3127706-3127813 (-)

Homology

• Gene Tree
  Gm56173
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002074997 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002074997	Ensembl Gene Model | MGI Sequence Detail	108	C57BL/6J
transcript	ENSMUST00020183765	Ensembl | MGI Sequence Detail	108	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;