Gm56170 Gene Detail

Summary

• Symbol
  Gm56170
• Name
  predicted gene, 56170

• Feature Type
  snoRNA gene
• IDs
  MGI:6848798
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr4:3619189-3619315 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  69 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848798	snoRNA gene	Chr4:3619189-3619315 (+)
129S1/SvImJ	ENSMUSG00200001363	snoRNA gene	Chr4:234342-234468 (+)
A/J	ENSMUSG00195002889	snoRNA gene	Chr4:652945-653071 (+)
AKR/J	ENSMUSG00220001332	snoRNA gene	Chr4:484008-484134 (+)
BALB/cJ	ENSMUSG00180004590	snoRNA gene	Chr4:228004-228130 (+)
C3H/HeJ	ENSMUSG00175017954	snoRNA gene	Chr4:757749-757875 (+)
C57BL/6NJ	ENSMUSG00215004604	snoRNA gene	Chr4:343388-343514 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005026611	snoRNA gene	Chr4:521942-522068 (+)
CBA/J	ENSMUSG00210002572	snoRNA gene	Chr4:498354-498480 (+)
DBA/2J	ENSMUSG00185002533	snoRNA gene	Chr4:619646-619772 (+)
FVB/NJ	ENSMUSG00205003452	snoRNA gene	Chr4:256842-256968 (+)
JF1/MsJ	ENSUMUG00000002677	snoRNA gene	Chr4:771513-771639 (+)
LP/J	ENSMUSG00230008462	snoRNA gene	Chr4:3784807-3784933 (+)
NOD/ShiLtJ	ENSMUSG00190014167	snoRNA gene	Chr4:327814-327940 (+)
NZO/HlLtJ	ENSMUSG00225000848	snoRNA gene	Chr4:7769406-7769532 (+)
PWK/PhJ	ENSLUMG00010006008	snoRNA gene	Chr4:229559-229685 (+)
SPRET/EiJ	ENSMSPG00010003113	snoRNA gene	Chr4:400123-400247 (+)
WSB/EiJ	ENSIUOG00005014733	snoRNA gene	Chr4:256390-256516 (+)

Homology

• Gene Tree
  Gm56170
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076805 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076805	Ensembl Gene Model | MGI Sequence Detail	127	C57BL/6J
transcript	ENSMUST00020181776	Ensembl | MGI Sequence Detail	127	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;