Gm56166 Gene Detail

Summary

• Symbol
  Gm56166
• Name
  predicted gene, 56166

• Feature Type
  rRNA gene
• IDs
  MGI:6848790
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:78354457-78354572 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  101 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848790	rRNA gene	Chr10:78354457-78354572 (+)
129S1/SvImJ	ENSMUSG00200050481	rRNA gene	Chr10:75032585-75032700 (+)
A/J	ENSMUSG00195049653	rRNA gene	Chr10:75369283-75369398 (+)
AKR/J	ENSMUSG00220048809	rRNA gene	Chr10:75028952-75029067 (+)
BALB/cJ	ENSMUSG00180053010	rRNA gene	Chr10:75383657-75383772 (+)
C3H/HeJ	ENSMUSG00175052910	rRNA gene	Chr10:75254754-75254869 (+)
C57BL/6NJ	ENSMUSG00215053348	rRNA gene	Chr10:74992521-74992636 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005051720	rRNA gene	Chr10:74869900-74870015 (+)
CBA/J	ENSMUSG00210050214	rRNA gene	Chr10:75110881-75110996 (+)
DBA/2J	ENSMUSG00185053398	rRNA gene	Chr10:75453242-75453357 (+)
FVB/NJ	ENSMUSG00205052320	rRNA gene	Chr10:75145265-75145380 (+)
JF1/MsJ	ENSUMUG00000056041	rRNA gene	Chr10:76615305-76615420 (+)
LP/J	ENSMUSG00230051249	rRNA gene	Chr10:77222681-77222796 (+)
NOD/ShiLtJ	ENSMUSG00190052789	rRNA gene	Chr10:75430642-75430757 (+)
NZO/HlLtJ	ENSMUSG00225048177	rRNA gene	Chr10:81509594-81509709 (+)
PWK/PhJ	ENSLUMG00010051377	rRNA gene	Chr10:74996672-74996787 (+)
SPRET/EiJ	ENSMSPG00010048163	rRNA gene	Chr10:76801075-76801190 (+)
WSB/EiJ	ENSIUOG00005051987	rRNA gene	Chr10:75030152-75030267 (+)

Homology

• Gene Tree
  Gm56166
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075755 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075755	Ensembl Gene Model | MGI Sequence Detail	116	C57BL/6J
transcript	ENSMUST00020183282	Ensembl | MGI Sequence Detail	116	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;