Gm56162 Gene Detail

Summary

• Symbol
  Gm56162
• Name
  predicted gene, 56162

• Feature Type
  rRNA gene
• IDs
  MGI:6848782
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:78149999-78150117 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  107 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848782	rRNA gene	Chr10:78149999-78150117 (+)
129S1/SvImJ	ENSMUSG00200050290	rRNA gene	Chr10:74828119-74828237 (+)
A/J	ENSMUSG00195051105	rRNA gene	Chr10:75164781-75164899 (+)
AKR/J	ENSMUSG00220050045	rRNA gene	Chr10:74824467-74824585 (+)
BALB/cJ	ENSMUSG00180053053	rRNA gene	Chr10:75179170-75179288 (+)
C3H/HeJ	ENSMUSG00175052373	rRNA gene	Chr10:75050272-75050390 (+)
C57BL/6NJ	ENSMUSG00215052890	rRNA gene	Chr10:74788026-74788144 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005051762	rRNA gene	Chr10:74664716-74664834 (+)
CBA/J	ENSMUSG00210050400	rRNA gene	Chr10:74906400-74906518 (+)
DBA/2J	ENSMUSG00185054307	rRNA gene	Chr10:75248741-75248859 (+)
FVB/NJ	ENSMUSG00205051751	rRNA gene	Chr10:74940774-74940892 (+)
JF1/MsJ	ENSUMUG00000056223	rRNA gene	Chr10:76408972-76409090 (+)
LP/J	ENSMUSG00230051207	rRNA gene	Chr10:77018225-77018343 (+)
NOD/ShiLtJ	ENSMUSG00190053002	rRNA gene	Chr10:75226178-75226296 (+)
NZO/HlLtJ	ENSMUSG00225048042	rRNA gene	Chr10:81306017-81306135 (+)
PWK/PhJ	ENSLUMG00010052267	rRNA gene	Chr10:74793167-74793285 (+)
SPRET/EiJ	ENSMSPG00010047583	rRNA gene	Chr10:76575675-76575793 (+)
WSB/EiJ	ENSIUOG00005051426	rRNA gene	Chr10:74825957-74826075 (+)

Homology

• Gene Tree
  Gm56162
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075838 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075838	Ensembl Gene Model | MGI Sequence Detail	119	C57BL/6J
transcript	ENSMUST00020182397	Ensembl | MGI Sequence Detail	119	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;