Gm56161 Gene Detail

Summary

• Symbol
  Gm56161
• Name
  predicted gene, 56161

• Feature Type
  rRNA gene
• IDs
  MGI:6848780
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr4:58938025-58938109 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  118 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848780	rRNA gene	Chr4:58938025-58938109 (+)
129S1/SvImJ	ENSMUSG00200004140	rRNA gene	Chr4:55000380-55000464 (+)
A/J	ENSMUSG00195008400	rRNA gene	Chr4:55393399-55393482 (+)
AKR/J	ENSMUSG00220006388	rRNA gene	Chr4:55176946-55177029 (+)
BALB/cJ	ENSMUSG00180031368	rRNA gene	Chr4:54988301-54988384 (+)
C3H/HeJ	ENSMUSG00175022381	rRNA gene	Chr4:55144538-55144621 (+)
C57BL/6NJ	ENSMUSG00215030039	rRNA gene	Chr4:54995060-54995144 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005008503	rRNA gene	Chr4:55231302-55231384 (+)
CBA/J	ENSMUSG00210006186	rRNA gene	Chr4:54887581-54887664 (+)
DBA/2J	ENSMUSG00185018820	rRNA gene	Chr4:55229155-55229238 (+)
FVB/NJ	ENSMUSG00205018227	rRNA gene	Chr4:54454809-54454892 (+)
JF1/MsJ	ENSUMUG00000028607	rRNA gene	Chr4:55449064-55449147 (+)
LP/J	ENSMUSG00230005066	rRNA gene	Chr4:58782902-58782986 (+)
NOD/ShiLtJ	ENSMUSG00190040472	rRNA gene	Chr4:55067635-55067718 (+)
NZO/HlLtJ	ENSMUSG00225013591	rRNA gene	Chr4:63379153-63379236 (+)
PWK/PhJ	ENSLUMG00010007977	rRNA gene	Chr4:54321838-54321921 (+)
SPRET/EiJ	ENSMSPG00010033996	rRNA gene	Chr4:55492747-55492830 (+)
WSB/EiJ	ENSIUOG00005023193	rRNA gene	Chr4:54884117-54884200 (+)

Homology

• Gene Tree
  Gm56161
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076044 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076044	Ensembl Gene Model | MGI Sequence Detail	85	C57BL/6J
transcript	ENSMUST00020183731	Ensembl | MGI Sequence Detail	85	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;