Gm56154 Gene Detail

Summary

• Symbol
  Gm56154
• Name
  predicted gene, 56154

• Feature Type
  miRNA gene
• IDs
  MGI:6848766
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr9:15226138-15226204 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  70 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848766	miRNA gene	Chr9:15226138-15226204 (+)
129S1/SvImJ	ENSMUSG00200049419	miRNA gene	Chr9:12127997-12128063 (+)
A/J	ENSMUSG00195039389	miRNA gene	Chr9:12013616-12013682 (+)
AKR/J	ENSMUSG00220034827	miRNA gene	Chr9:11991050-11991116 (+)
BALB/cJ	ENSMUSG00180043550	miRNA gene	Chr9:12137623-12137689 (+)
C3H/HeJ	ENSMUSG00175042769	miRNA gene	Chr9:12084489-12084555 (+)
C57BL/6NJ	ENSMUSG00215037085	miRNA gene	Chr9:12079101-12079167 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005033777	miRNA gene	Chr9:12120843-12120909 (+)
CBA/J	ENSMUSG00210044488	miRNA gene	Chr9:12115672-12115738 (+)
DBA/2J	ENSMUSG00185026614	miRNA gene	Chr9:12204191-12204257 (+)
FVB/NJ	ENSMUSG00205042455	miRNA gene	Chr9:12188222-12188288 (+)
JF1/MsJ	ENSUMUG00000048969	miRNA gene	Chr9:12207113-12207179 (+)
LP/J	ENSMUSG00230044413	miRNA gene	Chr9:12626058-12626124 (+)
NOD/ShiLtJ	ENSMUSG00190045229	miRNA gene	Chr9:12114660-12114726 (+)
NZO/HlLtJ	ENSMUSG00225051239	miRNA gene	Chr9:12523627-12523693 (+)
PWK/PhJ	ENSLUMG00010048614	miRNA gene	Chr9:12140406-12140472 (+)
SPRET/EiJ	ENSMSPG00010026829	miRNA gene	Chr9:12325921-12325987 (+)
WSB/EiJ	ENSIUOG00005044944	miRNA gene	Chr9:11791381-11791447 (+)

Homology

• Gene Tree
  Gm56154
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076879 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076879	Ensembl Gene Model | MGI Sequence Detail	67	C57BL/6J
transcript	ENSMUST00020181718	Ensembl | MGI Sequence Detail	67	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;