Gm56149 Gene Detail

Summary

• Symbol
  Gm56149
• Name
  predicted gene, 56149

• Feature Type
  miRNA gene
• IDs
  MGI:6848756
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr1:166447931-166448051 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  53 from dbSNP Build 142
• Strain Annotations
  12

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848756	miRNA gene	Chr1:166447931-166448051 (+)
129S1/SvImJ	ENSMUSG00200046903	miRNA gene	Chr1:163951574-163951694 (+)
A/J	ENSMUSG00195049850	miRNA gene	Chr1:163258429-163258549 (+)
AKR/J	ENSMUSG00220014359	miRNA gene	Chr1:162981971-162982091 (+)
BALB/cJ	ENSMUSG00180046388	miRNA gene	Chr1:163503756-163503876 (+)
C3H/HeJ	ENSMUSG00175047512	miRNA gene	Chr1:163607278-163607398 (+)
C57BL/6NJ	ENSMUSG00215045568	miRNA gene	Chr1:163385373-163385493 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	ENSMUSG00210042199	miRNA gene	Chr1:163474967-163475087 (+)
DBA/2J	no annotation
FVB/NJ	ENSMUSG00205039094	miRNA gene	Chr1:162485531-162485651 (+)
JF1/MsJ	ENSUMUG00000012402	miRNA gene	Chr1:166870148-166870223 (+)
LP/J	ENSMUSG00230026633	miRNA gene	Chr1:167338767-167338887 (+)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	ENSMUSG00225004808	miRNA gene	Chr1:170924593-170924713 (+)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm56149
  

Sequences &
Gene Models

• All Sequences
  14

• Ensembl
  ENSMUSG00002076371 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076371	Ensembl Gene Model | MGI Sequence Detail	121	C57BL/6J
transcript	ENSMUST00020182317	Ensembl | MGI Sequence Detail	121	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;