Gm56127 Pseudogene Detail

Summary

• Symbol
  Gm56127
• Name
  predicted gene, 56127

• Feature Type
  pseudogene
• IDs
  MGI:6848713
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr9:122738056-122739045 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  120 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848713	pseudogene	Chr9:122738056-122739045 (+)
129S1/SvImJ	ENSMUSG00200031867	pseudogene	Chr9:119865685-119866674 (+)
A/J	ENSMUSG00195028974	pseudogene	Chr9:119005261-119006250 (+)
AKR/J	ENSMUSG00220019928	pseudogene	Chr9:119477238-119478227 (+)
BALB/cJ	ENSMUSG00180029846	pseudogene	Chr9:119545100-119546089 (+)
C3H/HeJ	ENSMUSG00175019743	pseudogene	Chr9:119781444-119782433 (+)
C57BL/6NJ	ENSMUSG00215036156	pseudogene	Chr9:119700810-119701799 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005017119	pseudogene	Chr9:119368283-119369272 (+)
CBA/J	ENSMUSG00210043608	pseudogene	Chr9:119505215-119506204 (+)
DBA/2J	ENSMUSG00185017322	pseudogene	Chr9:119840868-119841857 (+)
FVB/NJ	ENSMUSG00205029950	pseudogene	Chr9:119671830-119672819 (+)
JF1/MsJ	ENSUMUG00000047465	pseudogene	Chr9:119638212-119639199 (+)
LP/J	ENSMUSG00230037769	pseudogene	Chr9:120005836-120006825 (+)
NOD/ShiLtJ	ENSMUSG00190015140	pseudogene	Chr9:119448718-119449707 (+)
NZO/HlLtJ	ENSMUSG00225023996	pseudogene	Chr9:120266154-120267143 (+)
PWK/PhJ	ENSLUMG00010040029	pseudogene	Chr9:119534434-119535423 (+)
SPRET/EiJ	ENSMSPG00010025662	pseudogene	Chr9:121243981-121244970 (+)
WSB/EiJ	ENSIUOG00005022909	pseudogene	Chr9:118875888-118876877 (+)

Homology

• Gene Tree
  Gm56127
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000118660 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000118660	Ensembl Gene Model | MGI Sequence Detail	990	C57BL/6J
transcript	ENSMUST00000216462	Ensembl | MGI Sequence Detail	990	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;