Gm56121 Gene Detail

Summary

• Symbol
  Gm56121
• Name
  predicted gene, 56121

• Feature Type
  snoRNA gene
• IDs
  MGI:6848701
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr5:100018107-100018182 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  127 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848701	snoRNA gene	Chr5:100018107-100018182 (+)
129S1/SvImJ	ENSMUSG00200006741	snoRNA gene	Chr5:93759065-93759140 (+)
A/J	ENSMUSG00195036225	snoRNA gene	Chr5:93303302-93303377 (+)
AKR/J	ENSMUSG00220039151	snoRNA gene	Chr5:92772766-92772841 (+)
BALB/cJ	ENSMUSG00180035542	snoRNA gene	Chr5:93459439-93459514 (+)
C3H/HeJ	ENSMUSG00175033905	snoRNA gene	Chr5:95564135-95564210 (+)
C57BL/6NJ	ENSMUSG00215027439	snoRNA gene	Chr5:93402114-93402189 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005025691	snoRNA gene	Chr5:92798747-92798822 (+)
CBA/J	ENSMUSG00210036933	snoRNA gene	Chr5:94314454-94314529 (+)
DBA/2J	ENSMUSG00185037287	snoRNA gene	Chr5:97232774-97232849 (+)
FVB/NJ	ENSMUSG00205043924	snoRNA gene	Chr5:93209570-93209645 (+)
JF1/MsJ	ENSUMUG00000047483	snoRNA gene	Chr5:100243523-100243598 (+)
LP/J	ENSMUSG00230033343	snoRNA gene	Chr5:101300786-101300861 (+)
NOD/ShiLtJ	ENSMUSG00190028693	snoRNA gene	Chr5:93227121-93227196 (+)
NZO/HlLtJ	ENSMUSG00225013249	snoRNA gene	Chr5:109048649-109048724 (+)
PWK/PhJ	ENSLUMG00010015654	snoRNA gene	Chr5:92363752-92363827 (+)
SPRET/EiJ	ENSMSPG00010026250	snoRNA gene	Chr5:95263217-95263292 (+)
WSB/EiJ	ENSIUOG00005032207	snoRNA gene	Chr5:95958784-95958859 (+)

Homology

• Gene Tree
  Gm56121
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076587 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076587	Ensembl Gene Model | MGI Sequence Detail	76	C57BL/6J
transcript	ENSMUST00020182981	Ensembl | MGI Sequence Detail	76	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;