Gm56119 Gene Detail

Summary

• Symbol
  Gm56119
• Name
  predicted gene, 56119

• Feature Type
  snoRNA gene
• IDs
  MGI:6848697
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr5:99803560-99803691 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  125 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848697	snoRNA gene	Chr5:99803560-99803691 (+)
129S1/SvImJ	ENSMUSG00200006752	snoRNA gene	Chr5:93544544-93544675 (+)
A/J	ENSMUSG00195036254	snoRNA gene	Chr5:93088782-93088913 (+)
AKR/J	ENSMUSG00220039175	snoRNA gene	Chr5:92558236-92558367 (+)
BALB/cJ	ENSMUSG00180035563	snoRNA gene	Chr5:93244909-93245040 (+)
C3H/HeJ	ENSMUSG00175033931	snoRNA gene	Chr5:95343173-95343304 (+)
C57BL/6NJ	ENSMUSG00215027497	snoRNA gene	Chr5:93187495-93187626 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005025699	snoRNA gene	Chr5:92588561-92588692 (+)
CBA/J	ENSMUSG00210036946	snoRNA gene	Chr5:94099934-94100065 (+)
DBA/2J	ENSMUSG00185037296	snoRNA gene	Chr5:97018228-97018359 (+)
FVB/NJ	ENSMUSG00205043950	snoRNA gene	Chr5:92995061-92995192 (+)
JF1/MsJ	ENSUMUG00000047311	snoRNA gene	Chr5:100030465-100030596 (+)
LP/J	ENSMUSG00230028501	snoRNA gene	Chr5:101086284-101086415 (+)
NOD/ShiLtJ	ENSMUSG00190028708	snoRNA gene	Chr5:93012560-93012691 (+)
NZO/HlLtJ	ENSMUSG00225013335	snoRNA gene	Chr5:108834131-108834262 (+)
PWK/PhJ	ENSLUMG00010015627	snoRNA gene	Chr5:92148988-92149119 (+)
SPRET/EiJ	ENSMSPG00010026274	snoRNA gene	Chr5:95040115-95040246 (+)
WSB/EiJ	ENSIUOG00005032226	snoRNA gene	Chr5:95743942-95744072 (+)

Homology

• Gene Tree
  Gm56119
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076040 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076040	Ensembl Gene Model | MGI Sequence Detail	132	C57BL/6J
transcript	ENSMUST00020181731	Ensembl | MGI Sequence Detail	132	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;