Gm56117 Gene Detail

Summary

• Symbol
  Gm56117
• Name
  predicted gene, 56117

• Feature Type
  miRNA gene
• IDs
  MGI:6848693
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr1:134737013-134737106 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  92 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848693	miRNA gene	Chr1:134737013-134737106 (+)
129S1/SvImJ	ENSMUSG00200009377	miRNA gene	Chr1:132342172-132342260 (+)
A/J	ENSMUSG00195044858	miRNA gene	Chr1:131416598-131416690 (+)
AKR/J	ENSMUSG00220051145	miRNA gene	Chr1:131294794-131294886 (+)
BALB/cJ	ENSMUSG00180040445	miRNA gene	Chr1:131964900-131964993 (+)
C3H/HeJ	ENSMUSG00175046392	miRNA gene	Chr1:131660796-131660888 (+)
C57BL/6NJ	ENSMUSG00215046387	miRNA gene	Chr1:131666592-131666687 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005038890	miRNA gene	Chr1:130584192-130584254 (+)
CBA/J	ENSMUSG00210028348	miRNA gene	Chr1:131591511-131591599 (+)
DBA/2J	ENSMUSG00185033544	miRNA gene	Chr1:135973401-135973481 (+)
FVB/NJ	ENSMUSG00205046353	miRNA gene	Chr1:130923005-130923095 (+)
JF1/MsJ	ENSUMUG00000050032	miRNA gene	Chr1:135097780-135097872 (+)
LP/J	ENSMUSG00230039166	miRNA gene	Chr1:135499674-135499767 (+)
NOD/ShiLtJ	ENSMUSG00190046774	miRNA gene	Chr1:131605610-131605698 (+)
NZO/HlLtJ	ENSMUSG00225021858	miRNA gene	Chr1:139256662-139256754 (+)
PWK/PhJ	ENSLUMG00010028807	miRNA gene	Chr1:130723149-130723270 (+)
SPRET/EiJ	ENSMSPG00010046671	miRNA gene	Chr1:133523815-133523905 (+)
WSB/EiJ	ENSIUOG00005048862	miRNA gene	Chr1:131348898-131348986 (+)

Homology

• Gene Tree
  Gm56117
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075458 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075458	Ensembl Gene Model | MGI Sequence Detail	94	C57BL/6J
transcript	ENSMUST00020181799	Ensembl | MGI Sequence Detail	94	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;