Gm56100 Gene Detail

Summary

• Symbol
  Gm56100
• Name
  predicted gene, 56100

• Feature Type
  rRNA gene
• IDs
  MGI:6848659
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr7:29356586-29356701 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  94 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848659	rRNA gene	Chr7:29356586-29356701 (-)
129S1/SvImJ	ENSMUSG00200045361	rRNA gene	Chr7:19145908-19146023 (-)
A/J	ENSMUSG00195049188	rRNA gene	Chr7:21815195-21815310 (-)
AKR/J	ENSMUSG00220053400	rRNA gene	Chr7:22672099-22672214 (+)
BALB/cJ	ENSMUSG00180053998	rRNA gene	Chr7:19874635-19874750 (-)
C3H/HeJ	ENSMUSG00175039211	rRNA gene	Chr7:20920637-20920752 (-)
C57BL/6NJ	ENSMUSG00215054832	rRNA gene	Chr7:19046921-19047036 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005049992	rRNA gene	Chr7:20855328-20855443 (-)
CBA/J	ENSMUSG00210026816	rRNA gene	Chr7:20107499-20107614 (-)
DBA/2J	ENSMUSG00185054233	rRNA gene	Chr7:23205847-23205962 (-)
FVB/NJ	ENSMUSG00205052901	rRNA gene	Chr7:19886595-19886710 (-)
JF1/MsJ	ENSUMUG00000057462	rRNA gene	Chr7:27624269-27624384 (-)
LP/J	ENSMUSG00230053869	rRNA gene	Chr7:28376363-28376478 (-)
NOD/ShiLtJ	ENSMUSG00190052931	rRNA gene	Chr7:19540125-19540240 (-)
NZO/HlLtJ	ENSMUSG00225027571	rRNA gene	Chr7:27219527-27219642 (-)
PWK/PhJ	ENSLUMG00010052136	rRNA gene	Chr7:19583948-19584063 (-)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005053629	rRNA gene	Chr7:13828134-13828249 (-)

Homology

• Gene Tree
  Gm56100
  

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00002075405 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075405	Ensembl Gene Model | MGI Sequence Detail	116	C57BL/6J
transcript	ENSMUST00020181838	Ensembl | MGI Sequence Detail	116	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;