Gm56089 Gene Detail

Summary

• Symbol
  Gm56089
• Name
  predicted gene, 56089

• Feature Type
  unclassified non-coding RNA gene
• IDs
  MGI:6848637
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr4:123384024-123384129 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  78 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848637	unclassified non-coding RNA gene	Chr4:123384024-123384129 (+)
129S1/SvImJ	ENSMUSG00200014870	unclassified non-coding RNA gene	Chr4:116819943-116820048 (+)
A/J	ENSMUSG00195033526	unclassified non-coding RNA gene	Chr4:118150654-118150759 (+)
AKR/J	ENSMUSG00220023233	unclassified non-coding RNA gene	Chr4:117118684-117118789 (+)
BALB/cJ	ENSMUSG00180047336	unclassified non-coding RNA gene	Chr4:115788865-115788970 (+)
C3H/HeJ	ENSMUSG00175027599	unclassified non-coding RNA gene	Chr4:116801881-116801986 (+)
C57BL/6NJ	ENSMUSG00215040118	unclassified non-coding RNA gene	Chr4:118295719-118295824 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005046366	unclassified non-coding RNA gene	Chr4:117658202-117658307 (+)
CBA/J	ENSMUSG00210052747	unclassified non-coding RNA gene	Chr4:116430814-116430919 (+)
DBA/2J	ENSMUSG00185049443	unclassified non-coding RNA gene	Chr4:117963435-117963540 (+)
FVB/NJ	ENSMUSG00205029077	unclassified non-coding RNA gene	Chr4:116175217-116175322 (+)
JF1/MsJ	ENSUMUG00000028141	unclassified non-coding RNA gene	Chr4:118594379-118594477 (+)
LP/J	ENSMUSG00230047051	unclassified non-coding RNA gene	Chr4:121757990-121758095 (+)
NOD/ShiLtJ	ENSMUSG00190047919	unclassified non-coding RNA gene	Chr4:116168809-116168914 (+)
NZO/HlLtJ	ENSMUSG00225016504	unclassified non-coding RNA gene	Chr4:127665621-127665726 (+)
PWK/PhJ	ENSLUMG00010048051	unclassified non-coding RNA gene	Chr4:115618907-115619005 (+)
SPRET/EiJ	ENSMSPG00010041992	unclassified non-coding RNA gene	Chr4:117743936-117744042 (+)
WSB/EiJ	ENSIUOG00005047882	unclassified non-coding RNA gene	Chr4:116032997-116033102 (+)

Homology

• Gene Tree
  Gm56089
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076881 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076881	Ensembl Gene Model | MGI Sequence Detail	106	C57BL/6J
transcript	ENSMUST00020181840	Ensembl | MGI Sequence Detail	106	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;