Gm56088 Gene Detail

Summary

• Symbol
  Gm56088
• Name
  predicted gene, 56088

• Feature Type
  miRNA gene
• IDs
  MGI:6848635
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr5:64804976-64805092 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  115 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848635	miRNA gene	Chr5:64804976-64805092 (-)
129S1/SvImJ	ENSMUSG00200000221	miRNA gene	Chr5:60421051-60421167 (-)
A/J	ENSMUSG00195000440	miRNA gene	Chr5:59774306-59774422 (-)
AKR/J	ENSMUSG00220007082	miRNA gene	Chr5:59911439-59911555 (-)
BALB/cJ	ENSMUSG00180006645	miRNA gene	Chr5:59560112-59560228 (-)
C3H/HeJ	ENSMUSG00175029688	miRNA gene	Chr5:61586913-61587029 (-)
C57BL/6NJ	ENSMUSG00215002877	miRNA gene	Chr5:60349888-60350004 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005000445	miRNA gene	Chr5:59508569-59508685 (-)
CBA/J	ENSMUSG00210023572	miRNA gene	Chr5:60499871-60499987 (-)
DBA/2J	ENSMUSG00185005904	miRNA gene	Chr5:62357339-62357455 (-)
FVB/NJ	ENSMUSG00205011163	miRNA gene	Chr5:59311572-59311688 (-)
JF1/MsJ	ENSUMUG00000022979	miRNA gene	Chr5:66842355-66842475 (-)
LP/J	ENSMUSG00230009126	miRNA gene	Chr5:67033853-67033969 (-)
NOD/ShiLtJ	ENSMUSG00190000426	miRNA gene	Chr5:59499332-59499448 (-)
NZO/HlLtJ	ENSMUSG00225010614	miRNA gene	Chr5:72159737-72159853 (-)
PWK/PhJ	ENSLUMG00010004425	miRNA gene	Chr5:59462072-59462188 (-)
SPRET/EiJ	ENSMSPG00010035372	miRNA gene	Chr5:61271772-61271892 (-)
WSB/EiJ	ENSIUOG00005018768	miRNA gene	Chr5:62459484-62459602 (-)

Homology

• Gene Tree
  Gm56088
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002074850 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002074850	Ensembl Gene Model | MGI Sequence Detail	117	C57BL/6J
transcript	ENSMUST00020182321	Ensembl | MGI Sequence Detail	117	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;