Gm56086 Gene Detail

Summary

• Symbol
  Gm56086
• Name
  predicted gene, 56086

• Feature Type
  rRNA gene
• IDs
  MGI:6848631
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr1:165613403-165613520 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  133 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848631	rRNA gene	Chr1:165613403-165613520 (-)
129S1/SvImJ	ENSMUSG00200046748	rRNA gene	Chr1:163114202-163114319 (-)
A/J	ENSMUSG00195048581	rRNA gene	Chr1:162422805-162422922 (-)
AKR/J	ENSMUSG00220014186	rRNA gene	Chr1:162211342-162211459 (-)
BALB/cJ	ENSMUSG00180037381	rRNA gene	Chr1:162668215-162668332 (-)
C3H/HeJ	ENSMUSG00175044913	rRNA gene	Chr1:162763961-162764078 (-)
C57BL/6NJ	ENSMUSG00215040715	rRNA gene	Chr1:162549868-162549985 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005021238	rRNA gene	Chr1:161183721-161183838 (-)
CBA/J	ENSMUSG00210021757	rRNA gene	Chr1:162638432-162638549 (-)
DBA/2J	ENSMUSG00185011897	rRNA gene	Chr1:166885831-166885948 (-)
FVB/NJ	ENSMUSG00205010283	rRNA gene	Chr1:161677430-161677547 (-)
JF1/MsJ	ENSUMUG00000012081	rRNA gene	Chr1:166036938-166037055 (-)
LP/J	ENSMUSG00230026525	rRNA gene	Chr1:166503287-166503404 (-)
NOD/ShiLtJ	ENSMUSG00190039652	rRNA gene	Chr1:162470134-162470251 (-)
NZO/HlLtJ	ENSMUSG00225004765	rRNA gene	Chr1:170089085-170089202 (-)
PWK/PhJ	ENSLUMG00010045386	rRNA gene	Chr1:161407775-161407892 (-)
SPRET/EiJ	ENSMSPG00010049156	rRNA gene	Chr1:164904082-164904199 (-)
WSB/EiJ	ENSIUOG00005015865	rRNA gene	Chr1:161951576-161951690 (-)

Homology

• Gene Tree
  Gm56086
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076221 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076221	Ensembl Gene Model | MGI Sequence Detail	118	C57BL/6J
transcript	ENSMUST00020182664	Ensembl | MGI Sequence Detail	118	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;