Gm56080 Gene Detail

Summary

• Symbol
  Gm56080
• Name
  predicted gene, 56080

• Feature Type
  unclassified non-coding RNA gene
• IDs
  MGI:6848619
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr6:6821129-6821335 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  87 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848619	unclassified non-coding RNA gene	Chr6:6821129-6821335 (+)
129S1/SvImJ	ENSMUSG00200002036	unclassified non-coding RNA gene	Chr6:3906707-3906913 (+)
A/J	ENSMUSG00195002221	unclassified non-coding RNA gene	Chr6:3787836-3788042 (+)
AKR/J	ENSMUSG00220020873	unclassified non-coding RNA gene	Chr6:3694479-3694685 (+)
BALB/cJ	ENSMUSG00180001671	unclassified non-coding RNA gene	Chr6:3923711-3923917 (+)
C3H/HeJ	ENSMUSG00175007639	unclassified non-coding RNA gene	Chr6:3752476-3752682 (+)
C57BL/6NJ	ENSMUSG00215014062	unclassified non-coding RNA gene	Chr6:3875702-3875908 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005026251	unclassified non-coding RNA gene	Chr6:3772806-3773012 (+)
CBA/J	ENSMUSG00210021429	unclassified non-coding RNA gene	Chr6:3689167-3689373 (+)
DBA/2J	ENSMUSG00185025413	unclassified non-coding RNA gene	Chr6:3882162-3882368 (+)
FVB/NJ	ENSMUSG00205016346	unclassified non-coding RNA gene	Chr6:3890978-3891184 (+)
JF1/MsJ	ENSUMUG00000012089	unclassified non-coding RNA gene	Chr6:3869037-3869243 (+)
LP/J	ENSMUSG00230017006	unclassified non-coding RNA gene	Chr6:4881821-4882027 (+)
NOD/ShiLtJ	ENSMUSG00190017271	unclassified non-coding RNA gene	Chr6:3607133-3607339 (+)
NZO/HlLtJ	ENSMUSG00225018929	unclassified non-coding RNA gene	Chr6:6713254-6713460 (+)
PWK/PhJ	ENSLUMG00010025011	unclassified non-coding RNA gene	Chr6:3664784-3664990 (+)
SPRET/EiJ	ENSMSPG00010002847	unclassified non-coding RNA gene	Chr6:3611614-3611820 (+)
WSB/EiJ	ENSIUOG00005004193	unclassified non-coding RNA gene	Chr6:3870223-3870429 (+)

Homology

• Gene Tree
  Gm56080
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075212 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075212	Ensembl Gene Model | MGI Sequence Detail	207	C57BL/6J
transcript	ENSMUST00020182536	Ensembl | MGI Sequence Detail	207	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;