Gm56079 Gene Detail

Summary

• Symbol
  Gm56079
• Name
  predicted gene, 56079

• Feature Type
  unclassified non-coding RNA gene
• IDs
  MGI:6848617
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr6:6820942-6821121 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  85 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848617	unclassified non-coding RNA gene	Chr6:6820942-6821121 (+)
129S1/SvImJ	ENSMUSG00200002025	unclassified non-coding RNA gene	Chr6:3906520-3906699 (+)
A/J	ENSMUSG00195002215	unclassified non-coding RNA gene	Chr6:3787649-3787828 (+)
AKR/J	ENSMUSG00220020850	unclassified non-coding RNA gene	Chr6:3694292-3694471 (+)
BALB/cJ	ENSMUSG00180001666	unclassified non-coding RNA gene	Chr6:3923524-3923703 (+)
C3H/HeJ	ENSMUSG00175007622	unclassified non-coding RNA gene	Chr6:3752289-3752468 (+)
C57BL/6NJ	ENSMUSG00215014007	unclassified non-coding RNA gene	Chr6:3875515-3875694 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005026232	unclassified non-coding RNA gene	Chr6:3772619-3772798 (+)
CBA/J	ENSMUSG00210021423	unclassified non-coding RNA gene	Chr6:3688980-3689159 (+)
DBA/2J	ENSMUSG00185025383	unclassified non-coding RNA gene	Chr6:3881975-3882154 (+)
FVB/NJ	ENSMUSG00205016320	unclassified non-coding RNA gene	Chr6:3890791-3890970 (+)
JF1/MsJ	ENSUMUG00000012055	unclassified non-coding RNA gene	Chr6:3868850-3869029 (+)
LP/J	ENSMUSG00230016765	unclassified non-coding RNA gene	Chr6:4881634-4881813 (+)
NOD/ShiLtJ	ENSMUSG00190017246	unclassified non-coding RNA gene	Chr6:3606946-3607125 (+)
NZO/HlLtJ	ENSMUSG00225018723	unclassified non-coding RNA gene	Chr6:6713067-6713246 (+)
PWK/PhJ	ENSLUMG00010024983	unclassified non-coding RNA gene	Chr6:3664597-3664776 (+)
SPRET/EiJ	ENSMSPG00010002840	unclassified non-coding RNA gene	Chr6:3611427-3611606 (+)
WSB/EiJ	ENSIUOG00005004189	unclassified non-coding RNA gene	Chr6:3870036-3870215 (+)

Homology

• Gene Tree
  Gm56079
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075275 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075275	Ensembl Gene Model | MGI Sequence Detail	180	C57BL/6J
transcript	ENSMUST00020183108	Ensembl | MGI Sequence Detail	180	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;