Gm56054 Gene Detail

Summary

• Symbol
  Gm56054
• Name
  predicted gene, 56054

• Feature Type
  snRNA gene
• IDs
  MGI:6848567
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr11:68965841-68965941 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  117 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848567	snRNA gene	Chr11:68965841-68965941 (+)
129S1/SvImJ	ENSMUSG00200050158	snRNA gene	Chr11:65911119-65911219 (+)
A/J	ENSMUSG00195053183	snRNA gene	Chr11:65929730-65929830 (+)
AKR/J	ENSMUSG00220054218	snRNA gene	Chr11:66046629-66046729 (+)
BALB/cJ	ENSMUSG00180054023	snRNA gene	Chr11:66008531-66008631 (+)
C3H/HeJ	ENSMUSG00175054416	snRNA gene	Chr11:65958837-65958937 (+)
C57BL/6NJ	ENSMUSG00215055113	snRNA gene	Chr11:65734628-65734728 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005053678	snRNA gene	Chr11:65493815-65493915 (+)
CBA/J	ENSMUSG00210054329	snRNA gene	Chr11:65812913-65813013 (+)
DBA/2J	ENSMUSG00185056695	snRNA gene	Chr11:66012448-66012548 (+)
FVB/NJ	ENSMUSG00205053993	snRNA gene	Chr11:65903489-65903589 (+)
JF1/MsJ	ENSUMUG00000057216	snRNA gene	Chr11:66410579-66410679 (+)
LP/J	ENSMUSG00230053771	snRNA gene	Chr11:67121510-67121610 (+)
NOD/ShiLtJ	ENSMUSG00190054178	snRNA gene	Chr11:66041151-66041251 (+)
NZO/HlLtJ	ENSMUSG00225048656	snRNA gene	Chr11:69295317-69295417 (+)
PWK/PhJ	ENSLUMG00010053733	snRNA gene	Chr11:65926998-65927098 (+)
SPRET/EiJ	ENSMSPG00010049414	snRNA gene	Chr11:66657481-66657579 (+)
WSB/EiJ	ENSIUOG00005052555	snRNA gene	Chr11:65941208-65941308 (+)

Homology

• Gene Tree
  Gm56054
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076525 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076525	Ensembl Gene Model | MGI Sequence Detail	101	C57BL/6J
transcript	ENSMUST00020181749	Ensembl | MGI Sequence Detail	101	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;