Gm56040 Gene Detail

Summary

• Symbol
  Gm56040
• Name
  predicted gene, 56040

• Feature Type
  unclassified non-coding RNA gene
• IDs
  MGI:6848539
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr6:52225312-52225515 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  79 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848539	unclassified non-coding RNA gene	Chr6:52225312-52225515 (+)
129S1/SvImJ	ENSMUSG00200005306	unclassified non-coding RNA gene	Chr6:49202596-49202799 (+)
A/J	ENSMUSG00195006850	unclassified non-coding RNA gene	Chr6:48926520-48926723 (+)
AKR/J	ENSMUSG00220004840	unclassified non-coding RNA gene	Chr6:48635606-48635809 (+)
BALB/cJ	ENSMUSG00180024257	unclassified non-coding RNA gene	Chr6:49228253-49228456 (+)
C3H/HeJ	ENSMUSG00175017324	unclassified non-coding RNA gene	Chr6:48994846-48995049 (+)
C57BL/6NJ	ENSMUSG00215009711	unclassified non-coding RNA gene	Chr6:49179087-49179290 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005005096	unclassified non-coding RNA gene	Chr6:48485234-48485437 (+)
CBA/J	ENSMUSG00210018625	unclassified non-coding RNA gene	Chr6:49039158-49039361 (+)
DBA/2J	ENSMUSG00185014251	unclassified non-coding RNA gene	Chr6:49621382-49621585 (+)
FVB/NJ	ENSMUSG00205028389	unclassified non-coding RNA gene	Chr6:49279478-49279681 (+)
JF1/MsJ	ENSUMUG00000013535	unclassified non-coding RNA gene	Chr6:48994193-48994396 (+)
LP/J	ENSMUSG00230019616	unclassified non-coding RNA gene	Chr6:50699886-50700089 (+)
NOD/ShiLtJ	ENSMUSG00190039147	unclassified non-coding RNA gene	Chr6:48956537-48956740 (+)
NZO/HlLtJ	ENSMUSG00225013685	unclassified non-coding RNA gene	Chr6:52683882-52684085 (+)
PWK/PhJ	ENSLUMG00010021701	unclassified non-coding RNA gene	Chr6:48731240-48731443 (+)
SPRET/EiJ	ENSMSPG00010009716	unclassified non-coding RNA gene	Chr6:49315119-49315322 (+)
WSB/EiJ	ENSIUOG00005028143	unclassified non-coding RNA gene	Chr6:49301949-49302152 (+)

Homology

• Gene Tree
  Gm56040
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076839 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076839	Ensembl Gene Model | MGI Sequence Detail	204	C57BL/6J
transcript	ENSMUST00020183222	Ensembl | MGI Sequence Detail	204	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;