Gm56030 Gene Detail

Summary

• Symbol
  Gm56030
• Name
  predicted gene, 56030

• Feature Type
  miRNA gene
• IDs
  MGI:6848519
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr1:194910586-194910706 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  79 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848519	miRNA gene	Chr1:194910586-194910706 (+)
129S1/SvImJ	ENSMUSG00200004778	miRNA gene	Chr1:192707895-192708015 (+)
A/J	ENSMUSG00195009854	miRNA gene	Chr1:192286563-192286683 (+)
AKR/J	ENSMUSG00220005182	miRNA gene	Chr1:191543896-191544016 (+)
BALB/cJ	ENSMUSG00180019330	miRNA gene	Chr1:192353440-192353560 (+)
C3H/HeJ	ENSMUSG00175022570	miRNA gene	Chr1:192588579-192588699 (+)
C57BL/6NJ	ENSMUSG00215024035	miRNA gene	Chr1:191746954-191747074 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005002171	miRNA gene	Chr1:190310511-190310631 (+)
CBA/J	ENSMUSG00210003867	miRNA gene	Chr1:192219388-192219508 (+)
DBA/2J	ENSMUSG00185010972	miRNA gene	Chr1:196820219-196820339 (+)
FVB/NJ	ENSMUSG00205004763	miRNA gene	Chr1:191182918-191183038 (+)
JF1/MsJ	ENSUMUG00000008314	miRNA gene	Chr1:195785215-195785335 (+)
LP/J	ENSMUSG00230002199	miRNA gene	Chr1:196322384-196322504 (+)
NOD/ShiLtJ	ENSMUSG00190034774	miRNA gene	Chr1:192181965-192182085 (+)
NZO/HlLtJ	ENSMUSG00225016108	miRNA gene	Chr1:200076027-200076147 (+)
PWK/PhJ	ENSLUMG00010006590	miRNA gene	Chr1:191038149-191038269 (+)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005004832	miRNA gene	Chr1:191509198-191509318 (+)

Homology

• Gene Tree
  Gm56030
  

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00002076810 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076810	Ensembl Gene Model | MGI Sequence Detail	121	C57BL/6J
transcript	ENSMUST00020183637	Ensembl | MGI Sequence Detail	121	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;