Gm56016 Gene Detail

Summary

• Symbol
  Gm56016
• Name
  predicted gene, 56016

• Feature Type
  miRNA gene
• IDs
  MGI:6848491
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr5:29541778-29541844 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  90 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848491	miRNA gene	Chr5:29541778-29541844 (-)
129S1/SvImJ	ENSMUSG00200014258	miRNA gene	Chr5:25018738-25018804 (-)
A/J	ENSMUSG00195050120	miRNA gene	Chr5:24480740-24480806 (-)
AKR/J	ENSMUSG00220008983	miRNA gene	Chr5:24484551-24484617 (-)
BALB/cJ	ENSMUSG00180037575	miRNA gene	Chr5:24285365-24285431 (-)
C3H/HeJ	ENSMUSG00175050418	miRNA gene	Chr5:26259811-26259877 (-)
C57BL/6NJ	ENSMUSG00215042048	miRNA gene	Chr5:25004126-25004192 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005025695	miRNA gene	Chr5:24459592-24459658 (-)
CBA/J	ENSMUSG00210049414	miRNA gene	Chr5:25233046-25233112 (-)
DBA/2J	ENSMUSG00185040412	miRNA gene	Chr5:27095479-27095545 (-)
FVB/NJ	ENSMUSG00205041136	miRNA gene	Chr5:23993218-23993284 (-)
JF1/MsJ	ENSUMUG00000053106	miRNA gene	Chr5:31627281-31627347 (-)
LP/J	ENSMUSG00230048292	miRNA gene	Chr5:31703318-31703384 (-)
NOD/ShiLtJ	ENSMUSG00190016025	miRNA gene	Chr5:24292580-24292646 (-)
NZO/HlLtJ	ENSMUSG00225021370	miRNA gene	Chr5:36920169-36920235 (-)
PWK/PhJ	ENSLUMG00010049890	miRNA gene	Chr5:24396810-24396876 (-)
SPRET/EiJ	ENSMSPG00010043907	miRNA gene	Chr5:25539106-25539172 (-)
WSB/EiJ	ENSIUOG00005044574	miRNA gene	Chr5:27177522-27177588 (-)

Homology

• Gene Tree
  Gm56016
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075488 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075488	Ensembl Gene Model | MGI Sequence Detail	67	C57BL/6J
transcript	ENSMUST00020181738	Ensembl | MGI Sequence Detail	67	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;