Gm56013 Gene Detail

Summary

• Symbol
  Gm56013
• Name
  predicted gene, 56013

• Feature Type
  rRNA gene
• IDs
  MGI:6848485
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr5:53575915-53576024 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  125 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848485	rRNA gene	Chr5:53575915-53576024 (+)
129S1/SvImJ	ENSMUSG00200001407	rRNA gene	Chr5:49130160-49130269 (+)
A/J	ENSMUSG00195016536	rRNA gene	Chr5:48513513-48513622 (+)
AKR/J	ENSMUSG00220000960	rRNA gene	Chr5:48592477-48592586 (+)
BALB/cJ	ENSMUSG00180006847	rRNA gene	Chr5:48279589-48279698 (+)
C3H/HeJ	ENSMUSG00175016096	rRNA gene	Chr5:50313704-50313813 (+)
C57BL/6NJ	ENSMUSG00215001838	rRNA gene	Chr5:49052038-49052147 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005003229	rRNA gene	Chr5:48409043-48409152 (+)
CBA/J	ENSMUSG00210024708	rRNA gene	Chr5:49265551-49265660 (+)
DBA/2J	ENSMUSG00185000150	rRNA gene	Chr5:51139158-51139267 (+)
FVB/NJ	ENSMUSG00205003107	rRNA gene	Chr5:48106154-48106263 (+)
JF1/MsJ	ENSUMUG00000000947	rRNA gene	Chr5:55686818-55686927 (+)
LP/J	ENSMUSG00230010600	rRNA gene	Chr5:55793776-55793885 (+)
NOD/ShiLtJ	ENSMUSG00190000839	rRNA gene	Chr5:48206133-48206242 (+)
NZO/HlLtJ	ENSMUSG00225002759	rRNA gene	Chr5:60918974-60919083 (+)
PWK/PhJ	ENSLUMG00010001522	rRNA gene	Chr5:48354167-48354276 (+)
SPRET/EiJ	ENSMSPG00010013833	rRNA gene	Chr5:49838234-49838343 (+)
WSB/EiJ	ENSIUOG00005019602	rRNA gene	Chr5:51156373-51156482 (+)

Homology

• Gene Tree
  Gm56013
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075450 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075450	Ensembl Gene Model | MGI Sequence Detail	110	C57BL/6J
transcript	ENSMUST00020183297	Ensembl | MGI Sequence Detail	110	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;