Gm56011 Gene Detail

Summary

• Symbol
  Gm56011
• Name
  predicted gene, 56011

• Feature Type
  rRNA gene
• IDs
  MGI:6848481
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr5:53300502-53300580 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  99 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848481	rRNA gene	Chr5:53300502-53300580 (+)
129S1/SvImJ	ENSMUSG00200001268	rRNA gene	Chr5:48853991-48854069 (+)
A/J	ENSMUSG00195017015	rRNA gene	Chr5:48227483-48227561 (+)
AKR/J	ENSMUSG00220000881	rRNA gene	Chr5:48308923-48309001 (+)
BALB/cJ	ENSMUSG00180006986	rRNA gene	Chr5:48002904-48002982 (+)
C3H/HeJ	ENSMUSG00175015462	rRNA gene	Chr5:50030187-50030265 (+)
C57BL/6NJ	ENSMUSG00215001863	rRNA gene	Chr5:48775847-48775925 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005003234	rRNA gene	Chr5:48131291-48131369 (+)
CBA/J	ENSMUSG00210024460	rRNA gene	Chr5:48977109-48977187 (+)
DBA/2J	ENSMUSG00185000167	rRNA gene	Chr5:50855616-50855694 (+)
FVB/NJ	ENSMUSG00205002966	rRNA gene	Chr5:47829917-47829995 (+)
JF1/MsJ	ENSUMUG00000000730	rRNA gene	Chr5:55413877-55413955 (+)
LP/J	ENSMUSG00230010525	rRNA gene	Chr5:55517595-55517673 (+)
NOD/ShiLtJ	ENSMUSG00190000746	rRNA gene	Chr5:47922599-47922677 (+)
NZO/HlLtJ	ENSMUSG00225028665	rRNA gene	Chr5:60635353-60635431 (+)
PWK/PhJ	ENSLUMG00010001547	rRNA gene	Chr5:48075958-48076036 (+)
SPRET/EiJ	ENSMSPG00010013270	rRNA gene	Chr5:49566936-49567014 (+)
WSB/EiJ	ENSIUOG00005020374	rRNA gene	Chr5:50881989-50882067 (+)

Homology

• Gene Tree
  Gm56011
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076332 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076332	Ensembl Gene Model | MGI Sequence Detail	79	C57BL/6J
transcript	ENSMUST00020182313	Ensembl | MGI Sequence Detail	79	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;