Gm56009 Gene Detail

Summary

• Symbol
  Gm56009
• Name
  predicted gene, 56009

• Feature Type
  miRNA gene
• IDs
  MGI:6848477
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr1:164851914-164852025 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  138 from dbSNP Build 142
• Strain Annotations
  15

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848477	miRNA gene	Chr1:164851914-164852025 (+)
129S1/SvImJ	ENSMUSG00200006832	miRNA gene	Chr1:162352142-162352259 (+)
A/J	ENSMUSG00195023268	miRNA gene	Chr1:161656681-161656796 (+)
AKR/J	ENSMUSG00220014162	miRNA gene	Chr1:161445298-161445411 (+)
BALB/cJ	ENSMUSG00180041686	miRNA gene	Chr1:161906108-161906219 (+)
C3H/HeJ	ENSMUSG00175044200	miRNA gene	Chr1:162001894-162002003 (+)
C57BL/6NJ	ENSMUSG00215042060	miRNA gene	Chr1:161873969-161874080 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005021781	miRNA gene	Chr1:160464880-160464991 (+)
CBA/J	ENSMUSG00210021284	miRNA gene	Chr1:161876450-161876561 (+)
DBA/2J	no annotation
FVB/NJ	ENSMUSG00205010760	miRNA gene	Chr1:160936326-160936437 (+)
JF1/MsJ	no annotation
LP/J	ENSMUSG00230027042	miRNA gene	Chr1:165740928-165741045 (+)
NOD/ShiLtJ	ENSMUSG00190045197	miRNA gene	Chr1:161710909-161711024 (+)
NZO/HlLtJ	ENSMUSG00225005068	miRNA gene	Chr1:169327672-169327785 (+)
PWK/PhJ	ENSLUMG00010046534	miRNA gene	Chr1:160669904-160670015 (+)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005015627	miRNA gene	Chr1:161209120-161209239 (+)

Homology

• Gene Tree
  Gm56009
  

Sequences &
Gene Models

• All Sequences
  17

• Ensembl
  ENSMUSG00002075650 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075650	Ensembl Gene Model | MGI Sequence Detail	112	C57BL/6J
transcript	ENSMUST00020181843	Ensembl | MGI Sequence Detail	112	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;