Gm56006 Gene Detail

Summary

• Symbol
  Gm56006
• Name
  predicted gene, 56006

• Feature Type
  miRNA gene
• IDs
  MGI:6848471
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr4:103329056-103329156 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  93 from dbSNP Build 142
• Strain Annotations
  13

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848471	miRNA gene	Chr4:103329056-103329156 (+)
129S1/SvImJ	ENSMUSG00200030938	miRNA gene	Chr4:98354381-98354481 (+)
A/J	ENSMUSG00195008638	miRNA gene	Chr4:98908465-98908565 (+)
AKR/J	ENSMUSG00220006954	miRNA gene	Chr4:98328830-98328930 (+)
BALB/cJ	ENSMUSG00180034789	miRNA gene	Chr4:97777895-97777995 (+)
C3H/HeJ	ENSMUSG00175015798	miRNA gene	Chr4:98777251-98777351 (+)
C57BL/6NJ	ENSMUSG00215021993	miRNA gene	Chr4:98709033-98709133 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	ENSMUSG00210030123	miRNA gene	Chr4:98400882-98400982 (+)
DBA/2J	ENSMUSG00185022683	miRNA gene	Chr4:99106413-99106513 (+)
FVB/NJ	ENSMUSG00205016133	miRNA gene	Chr4:97290223-97290323 (+)
JF1/MsJ	no annotation
LP/J	ENSMUSG00230009815	miRNA gene	Chr4:102411202-102411302 (+)
NOD/ShiLtJ	ENSMUSG00190033385	miRNA gene	Chr4:97781186-97781286 (+)
NZO/HlLtJ	ENSMUSG00225032981	miRNA gene	Chr4:107528250-107528350 (+)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm56006
  

Sequences &
Gene Models

• All Sequences
  15

• Ensembl
  ENSMUSG00002076094 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076094	Ensembl Gene Model | MGI Sequence Detail	101	C57BL/6J
transcript	ENSMUST00020182600	Ensembl | MGI Sequence Detail	101	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;