Gm56002 Gene Detail

Summary

• Symbol
  Gm56002
• Name
  predicted gene, 56002

• Feature Type
  miRNA gene
• IDs
  MGI:6848463
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr9:117828404-117828498 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  113 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848463	miRNA gene	Chr9:117828404-117828498 (+)
129S1/SvImJ	ENSMUSG00200032315	miRNA gene	Chr9:114958462-114958553 (+)
A/J	ENSMUSG00195028146	miRNA gene	Chr9:114129863-114129955 (+)
AKR/J	ENSMUSG00220019510	miRNA gene	Chr9:114592310-114592404 (+)
BALB/cJ	ENSMUSG00180030405	miRNA gene	Chr9:114667295-114667387 (+)
C3H/HeJ	ENSMUSG00175019538	miRNA gene	Chr9:114910626-114910718 (+)
C57BL/6NJ	ENSMUSG00215035811	miRNA gene	Chr9:114779983-114780077 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005016993	miRNA gene	Chr9:114560897-114560979 (+)
CBA/J	ENSMUSG00210041623	miRNA gene	Chr9:114625277-114625371 (+)
DBA/2J	ENSMUSG00185018370	miRNA gene	Chr9:114959463-114959557 (+)
FVB/NJ	ENSMUSG00205029269	miRNA gene	Chr9:114798727-114798819 (+)
JF1/MsJ	ENSUMUG00000049675	miRNA gene	Chr9:114806777-114806860 (-)
LP/J	ENSMUSG00230038638	miRNA gene	Chr9:115086922-115087013 (+)
NOD/ShiLtJ	ENSMUSG00190015516	miRNA gene	Chr9:114536808-114536901 (+)
NZO/HlLtJ	ENSMUSG00225024163	miRNA gene	Chr9:115341874-115341968 (+)
PWK/PhJ	ENSLUMG00010037728	miRNA gene	Chr9:114728313-114728408 (+)
SPRET/EiJ	ENSMSPG00010023935	miRNA gene	Chr9:116418467-116418561 (+)
WSB/EiJ	ENSIUOG00005023822	miRNA gene	Chr9:114030001-114030095 (+)

Homology

• Gene Tree
  Gm56002
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076953 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076953	Ensembl Gene Model | MGI Sequence Detail	95	C57BL/6J
transcript	ENSMUST00020182648	Ensembl | MGI Sequence Detail	95	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;