Gm56000 Gene Detail

Summary

• Symbol
  Gm56000
• Name
  predicted gene, 56000

• Feature Type
  snRNA gene
• IDs
  MGI:6848459
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr6:120501858-120501959 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  13 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848459	snRNA gene	Chr6:120501858-120501959 (+)
129S1/SvImJ	ENSMUSG00200051121	snRNA gene	Chr6:117703441-117703542 (+)
A/J	ENSMUSG00195048820	snRNA gene	Chr6:117117544-117117645 (+)
AKR/J	ENSMUSG00220032535	snRNA gene	Chr6:116002754-116002855 (+)
BALB/cJ	ENSMUSG00180049452	snRNA gene	Chr6:117485183-117485284 (+)
C3H/HeJ	ENSMUSG00175041320	snRNA gene	Chr6:59984992-59985093 (-)
C57BL/6NJ	ENSMUSG00215048374	snRNA gene	Chr6:117468527-117468628 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005050901	snRNA gene	Chr6:117281155-117281256 (+)
CBA/J	ENSMUSG00210045251	snRNA gene	Chr6:117252224-117252325 (+)
DBA/2J	ENSMUSG00185049134	snRNA gene	Chr6:117906829-117906930 (+)
FVB/NJ	ENSMUSG00205052216	snRNA gene	Chr6:116351306-116351407 (+)
JF1/MsJ	ENSUMUG00000054718	snRNA gene	Chr6:116497737-116497838 (+)
LP/J	ENSMUSG00230049226	snRNA gene	Chr6:119100826-119100927 (+)
NOD/ShiLtJ	ENSMUSG00190051529	snRNA gene	Chr6:116865140-116865241 (+)
NZO/HlLtJ	ENSMUSG00225047620	snRNA gene	Chr6:120992361-120992462 (+)
PWK/PhJ	ENSLUMG00010050791	snRNA gene	Chr6:115853299-115853400 (+)
SPRET/EiJ	ENSMSPG00010047307	snRNA gene	Chr6:118723869-118723970 (+)
WSB/EiJ	ENSIUOG00005044764	snRNA gene	Chr6:117517361-117517462 (+)

Homology

• Gene Tree
  Gm56000
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075013 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075013	Ensembl Gene Model | MGI Sequence Detail	102	C57BL/6J
transcript	ENSMUST00020182826	Ensembl | MGI Sequence Detail	102	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;