Gm55999 Gene Detail

Summary

• Symbol
  Gm55999
• Name
  predicted gene, 55999

• Feature Type
  unclassified non-coding RNA gene
• IDs
  MGI:6848457
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr11:53592006-53592315 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  130 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848457	unclassified non-coding RNA gene	Chr11:53592006-53592315 (+)
129S1/SvImJ	ENSMUSG00200041031	unclassified non-coding RNA gene	Chr11:50587897-50588206 (+)
A/J	ENSMUSG00195036449	unclassified non-coding RNA gene	Chr11:50525179-50525488 (+)
AKR/J	ENSMUSG00220041917	unclassified non-coding RNA gene	Chr11:50714094-50714403 (+)
BALB/cJ	ENSMUSG00180037056	unclassified non-coding RNA gene	Chr11:50586592-50586901 (+)
C3H/HeJ	ENSMUSG00175038880	unclassified non-coding RNA gene	Chr11:50556476-50556785 (+)
C57BL/6NJ	ENSMUSG00215039062	unclassified non-coding RNA gene	Chr11:50379263-50379572 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005043857	unclassified non-coding RNA gene	Chr11:50148756-50149062 (+)
CBA/J	ENSMUSG00210030630	unclassified non-coding RNA gene	Chr11:50412374-50412683 (+)
DBA/2J	ENSMUSG00185028768	unclassified non-coding RNA gene	Chr11:50624326-50624635 (+)
FVB/NJ	ENSMUSG00205041206	unclassified non-coding RNA gene	Chr11:50454757-50455066 (+)
JF1/MsJ	ENSUMUG00000048443	unclassified non-coding RNA gene	Chr11:50993894-50994203 (+)
LP/J	ENSMUSG00230050197	unclassified non-coding RNA gene	Chr11:51805545-51805854 (+)
NOD/ShiLtJ	ENSMUSG00190043882	unclassified non-coding RNA gene	Chr11:50682235-50682544 (+)
NZO/HlLtJ	ENSMUSG00225032885	unclassified non-coding RNA gene	Chr11:53846509-53846818 (+)
PWK/PhJ	ENSLUMG00010036415	unclassified non-coding RNA gene	Chr11:50444028-50444337 (+)
SPRET/EiJ	ENSMSPG00010020352	unclassified non-coding RNA gene	Chr11:51131375-51131683 (+)
WSB/EiJ	ENSIUOG00005040659	unclassified non-coding RNA gene	Chr11:50460475-50460784 (+)

Homology

• Gene Tree
  Gm55999
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075965 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075965	Ensembl Gene Model | MGI Sequence Detail	310	C57BL/6J
transcript	ENSMUST00020183676	Ensembl | MGI Sequence Detail	310	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;