Gm55998 Gene Detail

Summary

• Symbol
  Gm55998
• Name
  predicted gene, 55998

• Feature Type
  miRNA gene
• IDs
  MGI:6848455
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr2:16964720-16964829 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  113 from dbSNP Build 142
• Strain Annotations
  26

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848455	miRNA gene	Chr2:16964720-16964829 (-)
129S1/SvImJ	ENSMUSG00200042710	miRNA gene	Chr2:13899006-13899115 (-)
129S1/SvImJ	ENSMUSG00200050724	miRNA gene	Chr4:108026185-108026294 (-)
129S1/SvImJ	ENSMUSG00200001441	miRNA gene	Chr4:15023965-15024074 (+)
129S1/SvImJ	ENSMUSG00200026330	miRNA gene	Chr18:793679-793788 (-)
A/J	ENSMUSG00195019848	miRNA gene	Chr2:13994853-13994962 (-)
AKR/J	ENSMUSG00220014216	miRNA gene	Chr2:13985252-13985361 (-)
BALB/cJ	ENSMUSG00180038048	miRNA gene	Chr2:14037714-14037823 (-)
C3H/HeJ	ENSMUSG00175023478	miRNA gene	Chr2:13990930-13991039 (-)
C3H/HeJ	ENSMUSG00175018964	miRNA gene	Chr4:15460483-15460592 (+)
C57BL/6NJ	ENSMUSG00215032752	miRNA gene	Chr2:14089569-14089678 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005011730	miRNA gene	Chr10:107920925-107921034 (+)
CAST/EiJ	ENSTCUG00005004708	miRNA gene	Chr2:13865649-13865758 (-)
CBA/J	ENSMUSG00210004032	miRNA gene	Chr2:14032355-14032464 (-)
DBA/2J	ENSMUSG00185040284	miRNA gene	Chr2:13932723-13932832 (-)
DBA/2J	ENSMUSG00185032096	miRNA gene	Chr18:982247-982356 (-)
FVB/NJ	ENSMUSG00205038854	miRNA gene	Chr18:744959-745068 (-)
FVB/NJ	ENSMUSG00205015715	miRNA gene	Chr2:13986390-13986499 (-)
JF1/MsJ	ENSUMUG00000005237	miRNA gene	Chr2:13897284-13897393 (-)
LP/J	ENSMUSG00230021122	miRNA gene	Chr2:15875025-15875134 (-)
NOD/ShiLtJ	ENSMUSG00190014852	miRNA gene	Chr2:14002026-14002135 (-)
NZO/HlLtJ	ENSMUSG00225001525	miRNA gene	Chr2:23625511-23625620 (-)
PWK/PhJ	ENSLUMG00010035687	miRNA gene	Chr2:14010362-14010471 (-)
SPRET/EiJ	ENSMSPG00010015757	miRNA gene	Chr2:14366603-14366712 (-)
WSB/EiJ	ENSIUOG00005015795	miRNA gene	Chr2:14113865-14113974 (-)
WSB/EiJ	ENSIUOG00005048733	miRNA gene	Chr6:126126441-126126550 (+)

Homology

• Gene Tree
  Gm55998
  

Sequences &
Gene Models

• All Sequences
  28

• Ensembl
  ENSMUSG00002076934 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076934	Ensembl Gene Model | MGI Sequence Detail	110	C57BL/6J
transcript	ENSMUST00020183410	Ensembl | MGI Sequence Detail	110	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;