Gm55997 Gene Detail

Summary

• Symbol
  Gm55997
• Name
  predicted gene, 55997

• Feature Type
  rRNA gene
• IDs
  MGI:6848453
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr5:92266036-92266142 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  113 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848453	rRNA gene	Chr5:92266036-92266142 (-)
129S1/SvImJ	ENSMUSG00200009375	rRNA gene	Chr5:88009644-88009750 (-)
A/J	ENSMUSG00195026111	rRNA gene	Chr5:87169051-87169157 (-)
AKR/J	ENSMUSG00220012653	rRNA gene	Chr5:87319319-87319425 (-)
BALB/cJ	ENSMUSG00180027091	rRNA gene	Chr5:87013701-87013807 (-)
C3H/HeJ	ENSMUSG00175043877	rRNA gene	Chr5:89114476-89114582 (-)
C57BL/6NJ	ENSMUSG00215032439	rRNA gene	Chr5:87866296-87866402 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005038889	rRNA gene	Chr5:86735757-86735863 (-)
CBA/J	ENSMUSG00210006955	rRNA gene	Chr5:87893211-87893317 (-)
DBA/2J	ENSMUSG00185040973	rRNA gene	Chr5:89829951-89830057 (-)
FVB/NJ	ENSMUSG00205034256	rRNA gene	Chr5:86718669-86718775 (-)
JF1/MsJ	ENSUMUG00000044712	rRNA gene	Chr5:94081158-94081264 (-)
LP/J	ENSMUSG00230028211	rRNA gene	Chr5:94520845-94520951 (-)
NOD/ShiLtJ	ENSMUSG00190038735	rRNA gene	Chr5:86797672-86797778 (-)
NZO/HlLtJ	ENSMUSG00225009688	rRNA gene	Chr5:99668917-99669023 (-)
PWK/PhJ	ENSLUMG00010032602	rRNA gene	Chr5:86759697-86759803 (-)
SPRET/EiJ	ENSMSPG00010035580	rRNA gene	Chr5:89132822-89132928 (-)
WSB/EiJ	ENSIUOG00005029383	rRNA gene	Chr5:89791994-89792100 (-)

Homology

• Gene Tree
  Gm55997
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075648 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075648	Ensembl Gene Model | MGI Sequence Detail	107	C57BL/6J
transcript	ENSMUST00020183242	Ensembl | MGI Sequence Detail	107	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;