Gm55996 Gene Detail

Summary

• Symbol
  Gm55996
• Name
  predicted gene, 55996

• Feature Type
  rRNA gene
• IDs
  MGI:6848451
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr7:112718905-112719015 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  155 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848451	rRNA gene	Chr7:112718905-112719015 (+)
129S1/SvImJ	ENSMUSG00200035121	rRNA gene	Chr7:99260415-99260525 (+)
A/J	ENSMUSG00195040077	rRNA gene	Chr7:103764162-103764272 (+)
AKR/J	ENSMUSG00220040453	rRNA gene	Chr7:97167055-97167165 (+)
BALB/cJ	ENSMUSG00180045763	rRNA gene	Chr7:100432217-100432327 (+)
C3H/HeJ	ENSMUSG00175025459	rRNA gene	Chr7:101073652-101073762 (+)
C57BL/6NJ	ENSMUSG00215051796	rRNA gene	Chr7:100378340-100378450 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005044926	rRNA gene	Chr7:103766059-103766169 (+)
CBA/J	ENSMUSG00210048667	rRNA gene	Chr7:100900632-100900742 (+)
DBA/2J	ENSMUSG00185022592	rRNA gene	Chr7:105250808-105250918 (+)
FVB/NJ	ENSMUSG00205049889	rRNA gene	Chr7:100858644-100858754 (+)
JF1/MsJ	ENSUMUG00000052569	rRNA gene	Chr7:110277955-110278065 (+)
LP/J	ENSMUSG00230038421	rRNA gene	Chr7:111346086-111346196 (+)
NOD/ShiLtJ	ENSMUSG00190046858	rRNA gene	Chr7:101056528-101056638 (+)
NZO/HlLtJ	ENSMUSG00225019549	rRNA gene	Chr7:109584381-109584491 (+)
PWK/PhJ	ENSLUMG00010044143	rRNA gene	Chr7:99414743-99414853 (+)
SPRET/EiJ	ENSMSPG00010042537	rRNA gene	Chr7:100598706-100598816 (+)
WSB/EiJ	ENSIUOG00005012283	rRNA gene	Chr7:101714761-101714871 (+)

Homology

• Gene Tree
  Gm55996
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075356 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075356	Ensembl Gene Model | MGI Sequence Detail	111	C57BL/6J
transcript	ENSMUST00020182076	Ensembl | MGI Sequence Detail	111	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;