Gm55994 Pseudogene Detail

Summary

• Symbol
  Gm55994
• Name
  predicted gene, 55994

• Feature Type
  pseudogene
• IDs
  MGI:6848448
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr4:123200893-123201010 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  96 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848448	pseudogene	Chr4:123200893-123201010 (-)
129S1/SvImJ	ENSMUSG00200014828	pseudogene	Chr4:116636759-116636876 (-)
A/J	ENSMUSG00195034666	pseudogene	Chr4:117967345-117967462 (-)
AKR/J	ENSMUSG00220022465	pseudogene	Chr4:116935342-116935459 (-)
BALB/cJ	ENSMUSG00180046053	pseudogene	Chr4:115605500-115605617 (-)
C3H/HeJ	ENSMUSG00175025296	pseudogene	Chr4:116618540-116618657 (-)
C57BL/6NJ	ENSMUSG00215040548	pseudogene	Chr4:118112386-118112503 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005045983	pseudogene	Chr4:117474757-117474874 (-)
CBA/J	ENSMUSG00210052860	pseudogene	Chr4:116224864-116224981 (-)
DBA/2J	ENSMUSG00185047367	pseudogene	Chr4:117780076-117780193 (-)
FVB/NJ	ENSMUSG00205025981	pseudogene	Chr4:115988409-115988526 (-)
JF1/MsJ	ENSUMUG00000023742	pseudogene	Chr4:118413749-118413866 (-)
LP/J	ENSMUSG00230046996	pseudogene	Chr4:121574849-121574966 (-)
NOD/ShiLtJ	ENSMUSG00190047310	pseudogene	Chr4:115982035-115982152 (-)
NZO/HlLtJ	ENSMUSG00225016412	pseudogene	Chr4:127482322-127482439 (-)
PWK/PhJ	ENSLUMG00010047701	pseudogene	Chr4:115435319-115435436 (-)
SPRET/EiJ	ENSMSPG00010040313	pseudogene	Chr4:117562278-117562395 (-)
WSB/EiJ	ENSIUOG00005048350	pseudogene	Chr4:115849853-115849970 (-)

Homology

• Gene Tree
  Gm55994
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000118657 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000118657	Ensembl Gene Model | MGI Sequence Detail	118	C57BL/6J
transcript	ENSMUST00000239455	Ensembl | MGI Sequence Detail	118	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;