Gm55988 Gene Detail

Summary

• Symbol
  Gm55988
• Name
  predicted gene, 55988

• Feature Type
  miRNA gene
• IDs
  MGI:6848436
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr9:115211167-115211289 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  113 from dbSNP Build 142
• Strain Annotations
  13

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848436	miRNA gene	Chr9:115211167-115211289 (+)
129S1/SvImJ	no annotation
A/J	ENSMUSG00195044893	miRNA gene	Chr9:111498232-111498354 (+)
AKR/J	no annotation
BALB/cJ	ENSMUSG00180030770	miRNA gene	Chr9:112035889-112036011 (+)
C3H/HeJ	ENSMUSG00175020237	miRNA gene	Chr9:112257843-112257965 (+)
C57BL/6NJ	ENSMUSG00215035519	miRNA gene	Chr9:112156855-112156977 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005016899	miRNA gene	Chr9:111927709-111927829 (+)
CBA/J	ENSMUSG00210043788	miRNA gene	Chr9:111999180-111999302 (+)
DBA/2J	ENSMUSG00185017616	miRNA gene	Chr9:112335935-112336057 (+)
FVB/NJ	no annotation
JF1/MsJ	ENSUMUG00000051034	miRNA gene	Chr9:112170541-112170663 (+)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190015539	miRNA gene	Chr9:111913969-111914091 (+)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010038253	miRNA gene	Chr9:112096519-112096641 (+)
SPRET/EiJ	ENSMSPG00010023538	miRNA gene	Chr9:113763072-113763190 (+)
WSB/EiJ	ENSIUOG00005021663	miRNA gene	Chr9:111383278-111383400 (+)

Homology

• Gene Tree
  Gm55988
  

Sequences &
Gene Models

• All Sequences
  15

• Ensembl
  ENSMUSG00002075081 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075081	Ensembl Gene Model | MGI Sequence Detail	123	C57BL/6J
transcript	ENSMUST00020181830	Ensembl | MGI Sequence Detail	123	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;