Gm55986 Gene Detail

Summary

• Symbol
  Gm55986
• Name
  predicted gene, 55986

• Feature Type
  miRNA gene
• IDs
  MGI:6848432
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr4:140444354-140444417 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  124 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848432	miRNA gene	Chr4:140444354-140444417 (+)
129S1/SvImJ	ENSMUSG00200046379	miRNA gene	Chr4:133864015-133864078 (+)
A/J	ENSMUSG00195037643	miRNA gene	Chr4:135210094-135210157 (+)
AKR/J	ENSMUSG00220048190	miRNA gene	Chr4:134209570-134209633 (+)
BALB/cJ	ENSMUSG00180047482	miRNA gene	Chr4:132849428-132849491 (+)
C3H/HeJ	ENSMUSG00175041644	miRNA gene	Chr4:133877848-133877911 (+)
C57BL/6NJ	ENSMUSG00215051148	miRNA gene	Chr4:135395665-135395728 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005013631	miRNA gene	Chr4:134834529-134834592 (+)
CBA/J	ENSMUSG00210029805	miRNA gene	Chr4:133501856-133501919 (+)
DBA/2J	ENSMUSG00185051720	miRNA gene	Chr4:135011617-135011680 (+)
FVB/NJ	ENSMUSG00205044748	miRNA gene	Chr4:133272660-133272723 (+)
JF1/MsJ	ENSUMUG00000049929	miRNA gene	Chr4:135703489-135703552 (+)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190034278	miRNA gene	Chr4:133267509-133267572 (+)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010046146	miRNA gene	Chr4:132697200-132697263 (+)
SPRET/EiJ	ENSMSPG00010034569	miRNA gene	Chr4:134756169-134756232 (+)
WSB/EiJ	ENSIUOG00005047112	miRNA gene	Chr4:133152686-133152749 (+)

Homology

• Gene Tree
  Gm55986
  

Sequences &
Gene Models

• All Sequences
  18

• Ensembl
  ENSMUSG00002075547 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075547	Ensembl Gene Model | MGI Sequence Detail	64	C57BL/6J
transcript	ENSMUST00020182378	Ensembl | MGI Sequence Detail	64	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;