Gm55985 Gene Detail

Summary

• Symbol
  Gm55985
• Name
  predicted gene, 55985

• Feature Type
  snRNA gene
• IDs
  MGI:6848430
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr5:52500460-52500564 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  103 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848430	snRNA gene	Chr5:52500460-52500564 (-)
129S1/SvImJ	ENSMUSG00200001450	snRNA gene	Chr5:48053326-48053430 (-)
A/J	ENSMUSG00195015763	snRNA gene	Chr5:47410844-47410948 (-)
AKR/J	ENSMUSG00220000956	snRNA gene	Chr5:47480525-47480629 (-)
BALB/cJ	ENSMUSG00180007108	snRNA gene	Chr5:47183735-47183839 (-)
C3H/HeJ	ENSMUSG00175016192	snRNA gene	Chr5:49200717-49200821 (-)
C57BL/6NJ	ENSMUSG00215001871	snRNA gene	Chr5:47975130-47975234 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005003181	snRNA gene	Chr5:47332730-47332834 (-)
CBA/J	ENSMUSG00210024440	snRNA gene	Chr5:48161105-48161209 (-)
DBA/2J	ENSMUSG00185001521	snRNA gene	Chr5:50039571-50039675 (-)
FVB/NJ	ENSMUSG00205002987	snRNA gene	Chr5:46990398-46990502 (-)
JF1/MsJ	ENSUMUG00000000716	snRNA gene	Chr5:54612112-54612216 (-)
LP/J	ENSMUSG00230010758	snRNA gene	Chr5:54717008-54717112 (-)
NOD/ShiLtJ	ENSMUSG00190000823	snRNA gene	Chr5:47106651-47106755 (-)
NZO/HlLtJ	ENSMUSG00225028715	snRNA gene	Chr5:59819296-59819400 (-)
PWK/PhJ	ENSLUMG00010001495	snRNA gene	Chr5:47283071-47283175 (-)
SPRET/EiJ	ENSMSPG00010013650	snRNA gene	Chr5:48769260-48769364 (-)
WSB/EiJ	ENSIUOG00005019981	snRNA gene	Chr5:50080902-50081006 (-)

Homology

• Gene Tree
  Gm55985
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075892 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075892	Ensembl Gene Model | MGI Sequence Detail	105	C57BL/6J
transcript	ENSMUST00020183613	Ensembl | MGI Sequence Detail	105	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;