Gm55981 Gene Detail

Summary

• Symbol
  Gm55981
• Name
  predicted gene, 55981

• Feature Type
  miRNA gene
• IDs
  MGI:6848422
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr5:51380930-51381016 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  87 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848422	miRNA gene	Chr5:51380930-51381016 (-)
129S1/SvImJ	ENSMUSG00200001595	miRNA gene	Chr5:46925379-46925446 (-)
A/J	ENSMUSG00195016046	miRNA gene	Chr5:46290862-46290948 (-)
AKR/J	ENSMUSG00220000804	miRNA gene	Chr5:46360554-46360640 (-)
BALB/cJ	ENSMUSG00180006784	miRNA gene	Chr5:46045227-46045333 (-)
C3H/HeJ	ENSMUSG00175015623	miRNA gene	Chr5:48080908-48080994 (-)
C57BL/6NJ	ENSMUSG00215001799	miRNA gene	Chr5:46855228-46855314 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005003282	miRNA gene	Chr5:46226872-46226966 (-)
CBA/J	ENSMUSG00210024703	miRNA gene	Chr5:47041365-47041451 (-)
DBA/2J	ENSMUSG00185001780	miRNA gene	Chr5:48919718-48919804 (-)
FVB/NJ	ENSMUSG00205003029	miRNA gene	Chr5:45870049-45870135 (-)
JF1/MsJ	ENSUMUG00000000801	miRNA gene	Chr5:53493737-53493817 (+)
LP/J	ENSMUSG00230011018	miRNA gene	Chr5:53589144-53589211 (-)
NOD/ShiLtJ	ENSMUSG00190000885	miRNA gene	Chr5:45994095-45994175 (+)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010001593	miRNA gene	Chr5:46163151-46163226 (-)
SPRET/EiJ	ENSMSPG00010013224	miRNA gene	Chr5:47635370-47635444 (+)
WSB/EiJ	ENSIUOG00005019946	miRNA gene	Chr5:48964382-48964470 (-)

Homology

• Gene Tree
  Gm55981
  

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00002076511 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076511	Ensembl Gene Model | MGI Sequence Detail	87	C57BL/6J
transcript	ENSMUST00020181890	Ensembl | MGI Sequence Detail	87	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;