Gm55979 Gene Detail

Summary

• Symbol
  Gm55979
• Name
  predicted gene, 55979

• Feature Type
  miRNA gene
• IDs
  MGI:6848418
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr8:87313591-87313712 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  108 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848418	miRNA gene	Chr8:87313591-87313712 (+)
129S1/SvImJ	ENSMUSG00200017589	miRNA gene	Chr8:81658806-81658930 (+)
A/J	ENSMUSG00195028694	miRNA gene	Chr8:82026748-82026869 (+)
AKR/J	ENSMUSG00220042299	miRNA gene	Chr8:82057664-82057788 (+)
BALB/cJ	ENSMUSG00180026207	miRNA gene	Chr8:81862291-81862415 (+)
C3H/HeJ	ENSMUSG00175027592	miRNA gene	Chr8:81962342-81962463 (+)
C57BL/6NJ	ENSMUSG00215031428	miRNA gene	Chr8:81580307-81580428 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005017131	miRNA gene	Chr8:81429971-81430089 (+)
CBA/J	ENSMUSG00210037392	miRNA gene	Chr8:81949449-81949570 (+)
DBA/2J	ENSMUSG00185039444	miRNA gene	Chr8:88058002-88058123 (+)
FVB/NJ	ENSMUSG00205040312	miRNA gene	Chr8:81005240-81005361 (+)
JF1/MsJ	ENSUMUG00000037949	miRNA gene	Chr8:90355132-90355247 (+)
LP/J	ENSMUSG00230031804	miRNA gene	Chr8:91655694-91655818 (+)
NOD/ShiLtJ	ENSMUSG00190015832	miRNA gene	Chr8:82035288-82035409 (+)
NZO/HlLtJ	ENSMUSG00225040390	miRNA gene	Chr8:95071189-95071310 (+)
PWK/PhJ	ENSLUMG00010044802	miRNA gene	Chr8:81679174-81679295 (+)
SPRET/EiJ	ENSMSPG00010033507	miRNA gene	Chr8:83601928-83602057 (+)
WSB/EiJ	ENSIUOG00005019667	miRNA gene	Chr8:82755969-82756090 (+)

Homology

• Gene Tree
  Gm55979
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076139 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076139	Ensembl Gene Model | MGI Sequence Detail	122	C57BL/6J
transcript	ENSMUST00020183115	Ensembl | MGI Sequence Detail	122	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;