Gm55973 Gene Detail

Summary

• Symbol
  Gm55973
• Name
  predicted gene, 55973

• Feature Type
  miRNA gene
• IDs
  MGI:6848406
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr4:120694685-120694794 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  63 from dbSNP Build 142
• Strain Annotations
  26

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848406	miRNA gene	Chr4:120694685-120694794 (+)
129S1/SvImJ	ENSMUSG00200014764	miRNA gene	Chr4:114601698-114601807 (+)
A/J	no annotation
AKR/J	ENSMUSG00220003965	miRNA gene	Chr1:140646787-140646896 (-)
AKR/J	ENSMUSG00220022179	miRNA gene	Chr4:115222737-115222846 (+)
BALB/cJ	ENSMUSG00180045903	miRNA gene	Chr4:113889896-113890005 (+)
C3H/HeJ	ENSMUSG00175007098	miRNA gene	Chr1:141122502-141122611 (-)
C3H/HeJ	ENSMUSG00175005239	miRNA gene	Chr3:3422206-3422315 (-)
C3H/HeJ	ENSMUSG00175000284	miRNA gene	Chr1:41551790-41551899 (+)
C3H/HeJ	ENSMUSG00175025814	miRNA gene	Chr4:114903043-114903152 (+)
C3H/HeJ	ENSMUSG00175050551	miRNA gene	Chr3:90129960-90130069 (+)
C57BL/6NJ	ENSMUSG00215040353	miRNA gene	Chr4:116034560-116034669 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	ENSMUSG00210052582	miRNA gene	Chr4:114509468-114509577 (+)
DBA/2J	ENSMUSG00185048717	miRNA gene	Chr4:116064510-116064619 (+)
FVB/NJ	ENSMUSG00205051745	miRNA gene	Chr3:89219905-89220014 (+)
FVB/NJ	ENSMUSG00205026087	miRNA gene	Chr4:113990680-113990789 (+)
FVB/NJ	ENSMUSG00205002858	miRNA gene	Chr1:140258780-140258889 (-)
JF1/MsJ	no annotation
LP/J	ENSMUSG00230007964	miRNA gene	Chr12:23266868-23266977 (+)
LP/J	ENSMUSG00230000260	miRNA gene	Chr3:5330451-5330560 (-)
LP/J	ENSMUSG00230000594	miRNA gene	Chr1:144866781-144866890 (-)
LP/J	ENSMUSG00230047444	miRNA gene	Chr3:92476021-92476130 (+)
LP/J	ENSMUSG00230046847	miRNA gene	Chr4:119419985-119420094 (+)
NOD/ShiLtJ	ENSMUSG00190045577	miRNA gene	Chr4:113902867-113902976 (+)
NZO/HlLtJ	ENSMUSG00225017307	miRNA gene	Chr4:124965441-124965550 (+)
NZO/HlLtJ	ENSMUSG00225000196	miRNA gene	Chr1:148633335-148633444 (-)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005048302	miRNA gene	Chr4:114217136-114217245 (+)
WSB/EiJ	ENSIUOG00005030301	miRNA gene	Chr1:140420845-140420954 (-)

Homology

• Gene Tree
  Gm55973
  

Sequences &
Gene Models

• All Sequences
  28

• Ensembl
  ENSMUSG00002076639 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076639	Ensembl Gene Model | MGI Sequence Detail	110	C57BL/6J
transcript	ENSMUST00020183120	Ensembl | MGI Sequence Detail	110	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;