Gm55971 Gene Detail

Summary

• Symbol
  Gm55971
• Name
  predicted gene, 55971

• Feature Type
  snRNA gene
• IDs
  MGI:6848402
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr1:61509600-61509702 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  99 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848402	snRNA gene	Chr1:61509600-61509702 (+)
129S1/SvImJ	ENSMUSG00200018886	snRNA gene	Chr1:59011677-59011779 (+)
A/J	ENSMUSG00195030331	snRNA gene	Chr1:58543528-58543630 (+)
AKR/J	ENSMUSG00220042841	snRNA gene	Chr1:58628733-58628835 (+)
BALB/cJ	ENSMUSG00180014518	snRNA gene	Chr1:58808951-58809053 (+)
C3H/HeJ	ENSMUSG00175001188	snRNA gene	Chr1:58926650-58926752 (+)
C57BL/6NJ	ENSMUSG00215034692	snRNA gene	Chr1:58858604-58858706 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005014614	snRNA gene	Chr1:58688844-58688946 (+)
CBA/J	ENSMUSG00210054180	snRNA gene	Chr1:58612359-58612461 (+)
DBA/2J	ENSMUSG00185055448	snRNA gene	Chr1:59731431-59731533 (+)
FVB/NJ	ENSMUSG00205023965	snRNA gene	Chr1:58564173-58564275 (+)
JF1/MsJ	ENSUMUG00000049926	snRNA gene	Chr1:58680921-58681023 (+)
LP/J	ENSMUSG00230029703	snRNA gene	Chr1:59731602-59731704 (+)
NOD/ShiLtJ	ENSMUSG00190042413	snRNA gene	Chr1:58802023-58802125 (+)
NZO/HlLtJ	ENSMUSG00225001341	snRNA gene	Chr1:62956173-62956275 (+)
PWK/PhJ	ENSLUMG00010027030	snRNA gene	Chr1:58209902-58210004 (+)
SPRET/EiJ	ENSMSPG00010028366	snRNA gene	Chr1:60184828-60184930 (+)
WSB/EiJ	ENSIUOG00005022204	snRNA gene	Chr1:58397458-58397560 (+)

Homology

• Gene Tree
  Gm55971
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075578 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075578	Ensembl Gene Model | MGI Sequence Detail	103	C57BL/6J
transcript	ENSMUST00020182894	Ensembl | MGI Sequence Detail	103	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;